RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 ZNF227Q86WZ6 799 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 TMEM178AQ8NBL3 297 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 NUBPLQ8TB37 319 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 ASB15Q8WXK1 588 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 EXOSC8Q96B26 276 aaKnown RBP16.72■□□□□ 0.27
HERC3-205ENST00000426683 TLCD1Q96CP7 247 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 ZNF681Q96N22 645 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 TAAR6Q96RI8 345 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 GAL3ST4Q96RP7 486 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 RASL10BQ96S79 203 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 BARD1Q99728 777 aaKnown RBP16.72■□□□□ 0.27
HERC3-205ENST00000426683 BRINP2Q9C0B6 783 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 ZNF395Q9H8N7 513 aaPredicted RBP16.72■□□□□ 0.27
HERC3-205ENST00000426683 ARGLU1Q9NWB6 273 aaPredicted RBP16.72■□□□□ 0.27
HERC3-205ENST00000426683 PCDHGB6Q9Y5F9 930 aa16.72■□□□□ 0.27
HERC3-205ENST00000426683 SKAP2O75563 359 aaPredicted RBP16.71■□□□□ 0.27
HERC3-205ENST00000426683 ATP1B1P05026 303 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 PTGER1P34995 402 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 UQCRFS1P47985 274 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 RPL38P63173 70 aaKnown RBP16.71■□□□□ 0.27
HERC3-205ENST00000426683 MAPKAPK3Q16644 382 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 FAM71E1Q6IPT2 247 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 SLC29A4Q7RTT9 530 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 GALNTL5Q7Z4T8 443 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 CYP4Z2PQ8N1L4 340 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 LRRC25Q8N386 305 aaPredicted RBP16.71■□□□□ 0.27
HERC3-205ENST00000426683 BCORP1Q8N888 145 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.71■□□□□ 0.27
HERC3-205ENST00000426683 MGARPQ8TDB4 240 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 FAR1Q8WVX9 515 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 TMEM125Q96AQ2 219 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 MYNNQ9NPC7 610 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 GIMAP4Q9NUV9 329 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 EHD3Q9NZN3 535 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 ERVK-11Q9UQG0 969 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 ENTPD4Q9Y227 616 aa16.71■□□□□ 0.27
HERC3-205ENST00000426683 WBP11Q9Y2W2 641 aaKnown RBP16.71■□□□□ 0.27
HERC3-205ENST00000426683 OR6C76A6NM76 312 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 A8MVJ9 347 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 LSM1O15116 133 aaKnown RBP16.7■□□□□ 0.26
HERC3-205ENST00000426683 OR6B1O95007 311 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 DDCP20711 480 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 GRK2P25098 689 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 SOX3P41225 446 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 WDR4P57081 412 aaKnown RBP16.7■□□□□ 0.26
HERC3-205ENST00000426683 PMP22Q01453 160 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 FUT7Q11130 342 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 EBPQ15125 230 aaKnown RBP16.7■□□□□ 0.26
HERC3-205ENST00000426683 MPEG1Q2M385 716 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 PRICKLE4Q2TBC4 344 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 GALNTL6Q49A17 601 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 RFTN2Q52LD8 501 aaPredicted RBP16.7■□□□□ 0.26
HERC3-205ENST00000426683 FAM111BQ6SJ93 734 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 IL20RBQ6UXL0 311 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 TICAM1Q8IUC6 712 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 GPALPP1Q8IXQ4 340 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 CCDC116Q8IYX3 515 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 VWA5B2Q8N398 1253 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 ZNF781Q8N8C0 355 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 ADCY4Q8NFM4 1077 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 FCRL1Q96LA6 429 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 OR10A5Q9H207 317 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 CLMPQ9H6B4 373 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 MIEF1Q9NQG6 463 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 SLC35C2Q9NQQ7 365 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 OLAHQ9NV23 265 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 HPF1Q9NWY4 346 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 MAT2BQ9NZL9 334 aa16.7■□□□□ 0.26
HERC3-205ENST00000426683 FASNP49327 2511 aaKnown RBP16.69■□□□□ 0.26
HERC3-205ENST00000426683 NME2P1O60361 137 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 ZNF354AO60765 605 aaPredicted RBP16.69■□□□□ 0.26
HERC3-205ENST00000426683 H2AFXP16104 143 aaPredicted RBP16.69■□□□□ 0.26
HERC3-205ENST00000426683 NME2P22392 152 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 TACR1P25103 407 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 SLC1A6P48664 564 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 SLC18A1P54219 525 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 SRSF11Q05519 484 aaKnown RBP16.69■□□□□ 0.26
HERC3-205ENST00000426683 MGAT2Q10469 447 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 MAP4K2Q12851 820 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 STX3Q13277 289 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 MRPL49Q13405 166 aaKnown RBP16.69■□□□□ 0.26
HERC3-205ENST00000426683 LTB4RQ15722 352 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 XKR7Q5GH72 579 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 PIGGQ5H8A4 983 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 AGBL2Q5U5Z8 902 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 IKBIPQ70UQ0 350 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 SAMD14Q8IZD0 417 aaPredicted RBP16.69■□□□□ 0.26
HERC3-205ENST00000426683 ZNF615Q8N8J6 731 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 FAM98AQ8NCA5 519 aaKnown RBP16.69■□□□□ 0.26
HERC3-205ENST00000426683 OR7G1Q8NGA0 311 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 SLC22A8Q8TCC7 542 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 ARL8AQ96BM9 186 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 EGLN2Q96KS0 407 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 PPP3R2Q96LZ3 170 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 C20orf27Q9GZN8 174 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 WWTR1Q9GZV5 400 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 NKIRAS1Q9NYS0 192 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 GIMAP2Q9UG22 337 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 TMED5Q9Y3A6 229 aa16.69■□□□□ 0.26
HERC3-205ENST00000426683 RAP2CQ9Y3L5 183 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms