RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 RPL3P39023 403 aaKnown RBP22.78■■□□□ 1.24
VEGFA-209ENST00000425836 MAP4K2Q12851 820 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 LY6DQ14210 128 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 CRB2Q5IJ48 1285 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 FAM111BQ6SJ93 734 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 RFWD2Q8NHY2 731 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 C9orf43Q8TAL5 461 aaPredicted RBP22.78■■□□□ 1.24
VEGFA-209ENST00000425836 ART5Q96L15 291 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 DEFB126Q9BYW3 111 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 BRINP2Q9C0B6 783 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 NPHS2Q9NP85 383 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 SLAMF7Q9NQ25 335 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 TCF7L2Q9NQB0 619 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 MAT2BQ9NZL9 334 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 GPR45Q9Y5Y3 372 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 CLPSP04118 112 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 S1PR1P21453 382 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 FUT7Q11130 342 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 FCRLBQ6BAA4 426 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 FAM9CQ8IZT9 166 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 OR9A2Q8NGT5 310 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 CIDECQ96AQ7 238 aaPredicted RBP22.77■■□□□ 1.24
VEGFA-209ENST00000425836 CTHRC1Q96CG8 243 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 NPAS2Q99743 824 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 DPY30Q9C005 99 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 GLIPR2Q9H4G4 154 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 ZBTB20Q9HC78 741 aaPredicted RBP22.77■■□□□ 1.24
VEGFA-209ENST00000425836 COPS7AQ9UBW8 275 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 TP53TG5Q9Y2B4 290 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 CACNA1GO43497 2377 aa22.77■■□□□ 1.24
VEGFA-209ENST00000425836 ATXN7O15265 892 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-209ENST00000425836 POLR3GO15318 223 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-209ENST00000425836 PDPK1O15530 556 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 PRKNO60260 465 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-209ENST00000425836 ALPPP05187 535 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 LAMP1P11279 417 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 NTSP30990 170 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 SSTR4P31391 388 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 NCBP2P52298 156 aaKnown RBP eCLIP22.76■■□□□ 1.23
VEGFA-209ENST00000425836 GYS2P54840 703 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 ZNF628Q5EBL2 1059 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 CPTPQ5TA50 214 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 ISLR2Q6UXK2 745 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 HSDL2Q6YN16 418 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 VWA5B2Q8N398 1253 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 ZNF675Q8TD23 568 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 COQ8BQ96D53 544 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 AMDHD1Q96NU7 426 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 ZNF317Q96PQ6 595 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-209ENST00000425836 CCDC28BQ9BUN5 200 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 ZNF71Q9NQZ8 489 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-209ENST00000425836 DCTN4Q9UJW0 460 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 PCDHGB7Q9Y5F8 929 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 UBDO15205 165 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 ZFAND5O76080 213 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 SFTPCP11686 197 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 PCSK2P16519 638 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 NME5P56597 212 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 TRMT12Q53H54 448 aaKnown RBP22.76■■□□□ 1.23
VEGFA-209ENST00000425836 C6orf163Q5TEZ5 329 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 LINC00696Q6ZRV3 163 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 SLC5A8Q8N695 610 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 MARK4Q96L34 752 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 LMF1Q96S06 567 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 PRPF18Q99633 342 aaKnown RBP22.76■■□□□ 1.23
VEGFA-209ENST00000425836 SIKE1Q9BRV8 207 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 ZNF639Q9UID6 485 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 MAPRE3Q9UPY8 281 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 ZNF451Q9Y4E5 1061 aa22.76■■□□□ 1.23
VEGFA-209ENST00000425836 ATMQ13315 3056 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 TMEM200CA6NKL6 621 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 MAN1A2O60476 641 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 IDO1P14902 403 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 DDX5P17844 614 aaKnown RBP22.75■■□□□ 1.23
VEGFA-209ENST00000425836 FRKP42685 505 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-209ENST00000425836 SLC37A1P57057 533 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 MRPS35P82673 323 aaKnown RBP22.75■■□□□ 1.23
VEGFA-209ENST00000425836 LACTB2Q53H82 288 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-209ENST00000425836 ACER2Q5QJU3 275 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 CGB2Q6NT52 195 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 RPS19BP1Q86WX3 136 aaKnown RBP22.75■■□□□ 1.23
VEGFA-209ENST00000425836 OR8K3Q8NH51 312 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 THAP3Q8WTV1 239 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-209ENST00000425836 STON2Q8WXE9 905 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 KAT2AQ92830 837 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 ZNF354BQ96LW1 612 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 SLC25A18Q9H1K4 315 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 CDCP1Q9H5V8 836 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 STMN3Q9NZ72 180 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 TEKT2Q9UIF3 430 aa22.75■■□□□ 1.23
VEGFA-209ENST00000425836 E9PBE3 544 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 UFM1P61960 85 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 RNF4P78317 190 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 MFAP5Q13361 173 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 GSTA3Q16772 222 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 IGFL2Q6UWQ7 119 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 RNF111Q6ZNA4 994 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 ASB18Q6ZVZ8 466 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 ZNF551Q7Z340 670 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-209ENST00000425836 CAMKMTQ7Z624 323 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms