RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 RCOR3Q9P2K3 495 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF639Q9UID6 485 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ENPP5Q9UJA9 477 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 VANGL2Q9ULK5 521 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 PSMD13Q9UNM6 376 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 WDR45Q9Y484 360 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ATG4BQ9Y4P1 393 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 FNDC1Q4ZHG4 1894 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ADGRA2Q96PE1 1338 aa3.43□□□□□ -1.86
SF3B1-205ENST00000424674 ATXN2Q99700 1313 aaKnown RBP3.43□□□□□ -1.86
SF3B1-205ENST00000424674 INSRP06213 1382 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 PPIAL4CA0A0B4J2A2 164 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TRBV11-1A0A0K0K1C0 115 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 LOC390937A0A1W2PQ73 354 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 A0A1W2PRB8 838 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 RNF222A6NCQ9 220 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 DNAJC9-AS1A6NH13 148 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 LINC00473A8K010 186 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 A8MUA0 341 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 E9PMD0 336 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 NPIPA3F8WFD2 350 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 SGK494L7N484 410 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 M0R296 226 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 FBP2O00757 339 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 CHUKO15111 745 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 MSI1O43347 362 aaKnown RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TRAPPC3O43617 180 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 PLPP2O43688 288 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 OR1F1O43749 312 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 OR10H2O60403 315 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ATP6AP2O75787 350 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 GRAP2O75791 330 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 RBBP9O75884 186 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TMCC1O94876 653 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 OR2F2O95006 317 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 CCNB2O95067 398 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 NXPH3O95157 252 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 HIST1H2AGP0C0S8 130 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 PPIAL4GP0DN37 164 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TFPIP10646 304 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 DARSP14868 501 aaKnown RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 CPN1P15169 458 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 NQO2P16083 231 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ACADSP16219 412 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 POLR2CP19387 275 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 CD40LGP29965 261 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 PTGER4P35408 488 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 CXCR3P49682 368 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 GDI2P50395 445 aaKnown RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 SLC26A2P50443 739 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 METAP2P50579 478 aaKnown RBP eCLIP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TPMTP51580 245 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 GEMP55040 296 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 NXPH1P58417 271 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 HERV-K104P63124 156 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 PAX5Q02548 391 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 EEF1A2Q05639 463 aaKnown RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 BST2Q10589 180 aaKnown RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 MSLNQ13421 630 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 STIM1Q13586 685 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 PON2Q15165 354 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 VAMP3Q15836 100 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 C2orf68Q2NKX9 166 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 PRAMEF19Q5SWL8 479 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TREML2Q5T2D2 321 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 NDUFAF5Q5TEU4 345 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 HHATQ5VTY9 493 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 PAPD7Q5XG87 772 aaKnown RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 NSUN5P2Q63ZY6 315 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 FAM109BQ6ICB4 259 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 FAM173BQ6P4H8 233 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 DOK6Q6PKX4 331 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 G2E3Q7L622 706 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 MAVSQ7Z434 540 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 DCXRQ7Z4W1 244 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 AMIGO2Q86SJ2 522 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 SATL1Q86VE3 508 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 SFTPA1Q8IWL2 248 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ADHFE1Q8IWW8 467 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 LRRC34Q8IZ02 419 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TDHQ8IZJ6 230 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 LSMEM2Q8N112 164 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM104Q8NE00 496 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 OR10Q1Q8NGQ4 319 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 SPATA22Q8NHS9 363 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ENKURQ8TC29 256 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 SSMEM1Q8WWF3 244 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ARNTL2Q8WYA1 636 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ST8SIA1Q92185 356 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 SUSD6Q92537 303 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 SEPT8Q92599 483 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 HIST1H2ACQ93077 130 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM45BQ96B21 275 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 MTERF3Q96E29 417 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 SGK494Q96LW2 274 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TGM7Q96PF1 710 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 SLC22A12Q96S37 553 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF347Q96SE7 839 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 CMKLR1Q99788 373 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms