RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CAPN14A8MX76 684 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 KIF2AO00139 706 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 HCN1O60741 890 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 CLPSP04118 112 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 ACVR2AP27037 513 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 XKP51811 444 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 KCNJ2P63252 427 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 PMPCAQ10713 525 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 FUT7Q11130 342 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 HLA-DQA1Q5Y7H0 255 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 ADGRD1Q6QNK2 874 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 GALNT12Q8IXK2 581 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 ACBD4Q8NC06 268 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 OR5M9Q8NGP3 310 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 ZNF483Q8TF39 744 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 SELENOMQ8WWX9 145 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 SARAFQ96BY9 339 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 C14orf79Q96F83 325 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 LURAP1Q96LR2 239 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 C1QTNF3Q9BXJ4 246 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 MRPL1Q9BYD6 325 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 ZFP64Q9NPA5 681 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 PNPLA3Q9NST1 481 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 NMRK1Q9NWW6 199 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 TEX10Q9NXF1 929 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 ACAD8Q9UKU7 415 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 SNX6Q9UNH7 406 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 CHCHD2Q9Y6H1 151 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 INTS1Q8N201 2190 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 TRGV5A0A0B4J1U4 118 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 A8MT66 165 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 TP53I11O14683 189 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 ABHD2P08910 425 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 TAC1P20366 129 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 ELAVL4P26378 380 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 SSTR4P31391 388 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 MAPK12P53778 367 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 CDH13P55290 713 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 NUP107P57740 925 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 NTRK2Q16620 822 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 SGO1Q5FBB7 561 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 TBCELQ5QJ74 424 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 C6orf163Q5TEZ5 329 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 PRAMEF20Q5VT98 475 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 ZNF585AQ6P3V2 769 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 MEX3BQ6ZN04 569 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 TIFABQ6ZNK6 161 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 RPRMLQ8N4K4 120 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 TMEM151AQ8N4L1 468 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 ZNF441Q8N8Z8 693 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 OR10G3Q8NGC4 313 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 CHTF18Q8WVB6 975 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 MTBPQ96DY7 904 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 EXO5Q9H790 373 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 BRF2Q9HAW0 419 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 PROK2Q9HC23 129 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 KCNJ16Q9NPI9 418 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 QPCTLQ9NXS2 382 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 CNOT11Q9UKZ1 510 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 SLC12A4Q9UP95 1085 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 PCDHA9Q9Y5H5 950 aa16.19■□□□□ 0.18
PDLIM2-208ENST00000416159 A0A1W2PS29 197 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 C1orf226A1L170 272 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 ANKRD33BA6NCL7 494 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 WDR1O75083 606 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 PDYNP01213 254 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 HOXD4P09016 255 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 CELA3AP09093 270 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 SBK3P0C264 359 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 CPMP14384 443 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 PORP16435 677 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 NT5EP21589 574 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 DEKP35659 375 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 TEX35Q5T0J7 233 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 WLSQ5T9L3 541 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 LETMD1Q6P1Q0 360 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 B3GNT6Q6ZMB0 384 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 RPS27LQ71UM5 84 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 TRMT10CQ7L0Y3 403 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 COMMD6Q7Z4G1 85 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 LRRC25Q8N386 305 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 ZNF615Q8N8J6 731 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 OR7G1Q8NGA0 311 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 TREX2Q9BQ50 279 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 OR10A5Q9H207 317 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 ACKR4Q9NPB9 350 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 TRPS1Q9UHF7 1281 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 NFU1Q9UMS0 254 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 NPFFR2Q9Y5X5 522 aa16.18■□□□□ 0.18
PDLIM2-208ENST00000416159 APCP25054 2843 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 A0A1B0GTL3 188 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 PPP6CO00743 305 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 CT62P0C5K7 136 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 RFPL3SP0C7P2 107 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 TSPAN8P19075 237 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 HSD17B3P37058 310 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 TMED10P49755 219 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 NRG3P56975 720 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 CLCQ05315 142 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 TMEM198Q66K66 360 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms