RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ZER1Q7Z7L7 766 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 ADGRF3Q8IZF5 1079 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 OR4F15Q8NGB8 312 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF461Q8TAF7 563 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 F2RL3Q96RI0 385 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 FZD3Q9NPG1 666 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 ATP6V1HQ9UI12 483 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 CLEC4AQ9UMR7 237 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 NTNG1Q9Y2I2 539 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 FRMPD3Q5JV73 1810 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 DSPPQ9NZW4 1301 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 SZT2Q5T011 3432 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 SLCO2B1O94956 709 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 H1F0P07305 194 aaKnown RBP13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 ALAS2P22557 587 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 DGKGP49619 791 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF750Q32MQ0 723 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF791Q3KP31 576 aaPredicted RBP13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 REEP3Q6NUK4 255 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 Q6ZNB5 142 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 GAREM2Q75VX8 874 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 DNAJC5GQ8N7S2 189 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 TMEM145Q8NBT3 493 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF582Q96NG8 517 aaPredicted RBP13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 SERHL2Q9H4I8 314 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 RRAGCQ9HB90 399 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 CNIH4Q9P003 139 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 A0A1W2PQ72 361 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 A0A1W2PRU2 124 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 HYAL3O43820 417 aaPredicted RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 DDX5P17844 614 aaKnown RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 IL12RB1P42701 662 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 MANFP55145 182 aaKnown RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 XKRXQ6PP77 449 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 FAM20CQ8IXL6 584 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 HCAR2Q8TDS4 363 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 APOBEC4Q8WW27 367 aaKnown RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 ARMC5Q96C12 935 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 TMEM169Q96HH4 297 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 UCKL1Q9NWZ5 548 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 HCN2Q9UL51 889 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 PCYT1BQ9Y5K3 369 aaPredicted RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 ANAPC1Q9H1A4 1944 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 FAM240BA0A1B0GVZ2 78 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 ZC3H12DA2A288 527 aaKnown RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 NEDD8-MDP1E9PL57 170 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 SLC28A2O43868 658 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 LEFTY1O75610 366 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 MAP2K3P46734 347 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 IRF5Q13568 498 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF630Q2M218 657 aaPredicted RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 WSCD2Q2TBF2 565 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 CDKL4Q5MAI5 379 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 DDI2Q5TDH0 399 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF783Q6ZMS7 281 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 TMEM38AQ9H6F2 299 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 SLA2Q9H6Q3 261 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 TRPC4Q9UBN4 977 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 RPL36Q9Y3U8 105 aaKnown RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 A0A1W2PS29 197 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 CATP04040 527 aaKnown RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 NUMA1Q14980 2115 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 NCF4Q15080 339 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 TRIQKQ629K1 86 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF57Q68EA5 555 aaPredicted RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 C12orf73Q69YU5 71 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 MTFR2Q6P444 385 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 CAMKMTQ7Z624 323 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 LAPTM4BQ86VI4 370 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 KIF18BQ86Y91 864 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 C19orf18Q8NEA5 215 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 SUN5Q8TC36 379 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 SMAP2Q8WU79 429 aaPredicted RBP13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 ECHDC3Q96DC8 303 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 RNFT2Q96EX2 444 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 SPATA9Q9BWV2 254 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 NLNQ9BYT8 704 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 RNF186Q9NXI6 227 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 FBXW2Q9UKT8 454 aa13.81□□□□□ -0.2
SEMA3F-202ENST00000413852 IQCMA0A1B0GVH7 501 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 PAHP00439 452 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 ALPPP05187 535 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 PSMB5P28074 263 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 SP140Q13342 867 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 ILKQ13418 452 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 C1DQ13901 141 aaKnown RBP13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 KIAA1161Q6NSJ0 714 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 AMIGO1Q86WK6 493 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 BBS1Q8NFJ9 593 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 OR56A3Q8NH54 315 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 GRPEL2Q8TAA5 225 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 KCTD7Q96MP8 289 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 LYSMD1Q96S90 227 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 TBX5Q99593 518 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 BRF2Q9HAW0 419 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 AKAP8O43823 692 aaKnown RBP13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 OR2B3O76000 313 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 SLC2A10O95528 541 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 SERPIND1P05546 499 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms