RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SLC7A9P82251 487 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 CDK5Q00535 292 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 PRKCZQ05513 592 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 CRTC2Q53ET0 693 aaPredicted RBP16.71■□□□□ 0.27
SDCBP-202ENST00000413219 IER5LQ5T953 404 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 TNFAIP8L2Q6P589 184 aaPredicted RBP16.71■□□□□ 0.27
SDCBP-202ENST00000413219 PDZD3Q86UT5 571 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 NLGN4YQ8NFZ3 816 aaPredicted RBP16.71■□□□□ 0.27
SDCBP-202ENST00000413219 GLYATL1Q969I3 302 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 LRR1Q96L50 414 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 COQ7Q99807 217 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 NEUROD4Q9HD90 331 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 GIMAP4Q9NUV9 329 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 PHF11Q9UIL8 331 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 HELZP42694 1942 aaKnown RBP16.71■□□□□ 0.26
SDCBP-202ENST00000413219 CPNE3O75131 537 aaKnown RBP16.7■□□□□ 0.26
SDCBP-202ENST00000413219 SLC43A1O75387 559 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 PDHA2P29803 388 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 HLA-FP30511 346 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 MAN2A2P49641 1150 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 CYP4F8P98187 520 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 CNTN1Q12860 1018 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 RAB33AQ14088 237 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 GINS1Q14691 196 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 TMIGD1Q6UXZ0 262 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 CREB3L2Q70SY1 520 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 LRRC56Q8IYG6 542 aaPredicted RBP16.7■□□□□ 0.26
SDCBP-202ENST00000413219 TCEAL8Q8IYN2 117 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 Q8N402 240 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 IQCF1Q8N6M8 205 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 CELF5Q8N6W0 485 aaKnown RBP16.7■□□□□ 0.26
SDCBP-202ENST00000413219 OR4D11Q8NGI4 311 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 OR52P1PQ8NH57 321 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 MRPL17Q9NRX2 175 aaKnown RBP16.7■□□□□ 0.26
SDCBP-202ENST00000413219 A4GNTQ9UNA3 340 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 INSL5Q9Y5Q6 135 aa16.7■□□□□ 0.26
SDCBP-202ENST00000413219 A0A0G2JMP0 313 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 TRDV1A0A1B0GX56 115 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 ANKDD1BA6NHY2 528 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 CKMP06732 381 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 DDCP20711 480 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 APEX1P27695 318 aaKnown RBP16.69■□□□□ 0.26
SDCBP-202ENST00000413219 RAB25P57735 213 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 ZNF658BQ4V348 819 aaPredicted RBP16.69■□□□□ 0.26
SDCBP-202ENST00000413219 ENTPD8Q5MY95 495 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 CNIH2Q6PI25 160 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 Q6ZVU0 165 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 DEDD2Q8WXF8 326 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 TM9SF4Q92544 642 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 ZBED6CLQ96FA7 236 aaPredicted RBP16.69■□□□□ 0.26
SDCBP-202ENST00000413219 MARVELD1Q9BSK0 173 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 AHSPQ9NZD4 102 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 PRODHO43272 600 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 SOD2P04179 222 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 PSKH1P11801 424 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 PKLRP30613 574 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 SSTR4P31391 388 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 SMSP52788 366 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 RPS26P62854 115 aaKnown RBP16.69■□□□□ 0.26
SDCBP-202ENST00000413219 TMEM115Q12893 351 aaPredicted RBP16.69■□□□□ 0.26
SDCBP-202ENST00000413219 SF3A2Q15428 464 aaKnown RBP16.69■□□□□ 0.26
SDCBP-202ENST00000413219 SIGIRRQ6IA17 410 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 PODNL1Q6PEZ8 512 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 PAMR1Q6UXH9 720 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 SLC9B2Q86UD5 537 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 RBM45Q8IUH3 476 aaKnown RBP16.69■□□□□ 0.26
SDCBP-202ENST00000413219 CMTM8Q8IZV2 173 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 OR9A1PQ8NGU1 263 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 MRPS31Q92665 395 aaKnown RBP16.69■□□□□ 0.26
SDCBP-202ENST00000413219 SPNS1Q9H2V7 528 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 EPHX3Q9H6B9 360 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 MVB12BQ9H7P6 319 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 SEC14L3Q9UDX4 400 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 YARS2Q9Y2Z4 477 aaKnown RBP16.69■□□□□ 0.26
SDCBP-202ENST00000413219 ASB4Q9Y574 426 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 COL4A6Q14031 1691 aa16.69■□□□□ 0.26
SDCBP-202ENST00000413219 TSPAN11A1L157 253 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 TMEM88BA6NKF7 163 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 ANHXE9PGG2 379 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 SGK494L7N484 410 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 HMGN4O00479 90 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 PDPK1O15530 556 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 LYRM1O43325 122 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 CRYZL1O95825 349 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 GSTM3P21266 225 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 CFL1P23528 166 aaKnown RBP16.68■□□□□ 0.26
SDCBP-202ENST00000413219 MMP11P24347 488 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 EVX1P49640 407 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 MANFP55145 182 aaKnown RBP16.68■□□□□ 0.26
SDCBP-202ENST00000413219 ACSM5Q6NUN0 579 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 TMEM220Q6QAJ8 160 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 SLC36A4Q6YBV0 504 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 C6orf120Q7Z4R8 191 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 TECPR1Q7Z6L1 1165 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 MMP21Q8N119 569 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 SYT14Q8NB59 555 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 OR2A12Q8NGT7 310 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 SNAPC3Q92966 411 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 KCNJ15Q99712 375 aa16.68■□□□□ 0.26
SDCBP-202ENST00000413219 TMEM43Q9BTV4 400 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms