RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ZGRF1Q86YA3 2104 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 WASHC1A8K0Z3 465 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 A8MVJ9 347 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 ITM2AO43736 263 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 PRAMEF2O60811 474 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 IGKV3-11P04433 115 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 NTSP30990 170 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 ARRB2P32121 409 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 TRHRP34981 398 aaPredicted RBP10.13□□□□□ -0.79
CHMP3-205ENST00000409810 RPL3P39023 403 aaKnown RBP10.13□□□□□ -0.79
CHMP3-205ENST00000409810 FEN1P39748 380 aaKnown RBP10.13□□□□□ -0.79
CHMP3-205ENST00000409810 HLCSP50747 726 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 MLLT10P55197 1068 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 BST1Q10588 318 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 INPP5JQ15735 1006 aaPredicted RBP10.13□□□□□ -0.79
CHMP3-205ENST00000409810 XKR7Q5GH72 579 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF766Q5HY98 468 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 FAM71E1Q6IPT2 247 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 FAM180AQ6UWF9 173 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 ATCAYQ86WG3 371 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 MMP21Q8N119 569 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 VWA5B2Q8N398 1253 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 AMER2Q8N7J2 671 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 CATSPER1Q8NEC5 780 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 SLC22A8Q8TCC7 542 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 TUBGCP3Q96CW5 907 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 BBS4Q96RK4 519 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 SLC35C2Q9NQQ7 365 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 THAP1Q9NVV9 213 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 HPF1Q9NWY4 346 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 HAO1Q9UJM8 370 aa10.13□□□□□ -0.79
CHMP3-205ENST00000409810 EML6Q6ZMW3 1958 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 PRKNO60260 465 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 MAN1A2O60476 641 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 BCAS2O75934 225 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 OR2J2O76002 312 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 SLITRK5O94991 958 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 RASAL1O95294 804 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 MPIP34949 423 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 HPCAL1P37235 193 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 CD96P40200 585 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 HK2P52789 917 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 SLC37A1P57057 533 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 FUT7Q11130 342 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 CEBPEQ15744 281 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 PDCD2Q16342 344 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 MPEG1Q2M385 716 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 PRICKLE4Q2TBC4 344 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 TTMPQ5BVD1 217 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 HLA-DQA1Q5Y7H0 255 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 OPN5Q6U736 354 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 DGAT2L6Q6ZPD8 337 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 R3HCC1LQ7Z5L2 792 aaKnown RBP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 TICAM1Q8IUC6 712 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 C9orf40Q8IXQ3 194 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 DND1Q8IYX4 353 aaKnown RBP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 FAM9CQ8IZT9 166 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 CYP4Z2PQ8N1L4 340 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 SLC15A4Q8N697 577 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 BCORP1Q8N888 145 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF321PQ8N8H1 164 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 FNDC5Q8NAU1 212 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 MDS2Q8NDY4 140 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF675Q8TD23 568 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 DYDC1Q8WWB3 177 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 MIB2Q96AX9 1013 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 ERP27Q96DN0 273 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 CNRIP1Q96F85 164 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF764Q96H86 408 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF681Q96N22 645 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 TSSK3Q96PN8 268 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 GAL3ST4Q96RP7 486 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 RASL10BQ96S79 203 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 SORT1Q99523 831 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 TRIM4Q9C037 500 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 OR10A5Q9H207 317 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 MANSC1Q9H8J5 431 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 TRIM45Q9H8W5 580 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 ANKRD10Q9NXR5 420 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 PRODH2Q9UF12 536 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 ERVK-11Q9UQG0 969 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 EIF3LQ9Y262 564 aaKnown RBP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 COPG1Q9Y678 874 aaKnown RBP10.12□□□□□ -0.79
CHMP3-205ENST00000409810 EXPH5Q8NEV8 1989 aa10.12□□□□□ -0.79
CHMP3-205ENST00000409810 PRRC2CQ9Y520 2896 aaKnown RBP10.11□□□□□ -0.79
CHMP3-205ENST00000409810 C2orf92A0A1B0GVN3 265 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 ATP6AP2A0A1C7CYW4 349 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 A0A1W2PS29 197 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 CAPN14A8MX76 684 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 SLCO1B7G3V0H7 640 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 HRKO00198 91 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 WWP2O00308 870 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 KLF11O14901 512 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 PEX11AO75192 247 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 VPS4BO75351 444 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 SLC25A12O75746 678 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 ATP6AP2O75787 350 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 CRYABP02511 175 aaKnown RBP10.11□□□□□ -0.79
CHMP3-205ENST00000409810 PRPS2P11908 318 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms