RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 OR2A1Q8NGT9 310 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 NETO1Q8TDF5 533 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.78□□□□□ -0.68
SNX13-202ENST00000409604 ZNF775Q96BV0 537 aaPredicted RBP10.78□□□□□ -0.68
SNX13-202ENST00000409604 ASB9Q96DX5 294 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 GABRG3Q99928 467 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 TPK1Q9H3S4 243 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 SLC24A3Q9HC58 644 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 DOCK9Q9BZ29 2069 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 A6NCN8 305 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 GPR89AB7ZAQ6 455 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 KCNJ13O60928 360 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 GPR89BP0CG08 455 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 ATP5A1P25705 553 aaKnown RBP10.78□□□□□ -0.68
SNX13-202ENST00000409604 SSTR4P31391 388 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 KDELR2P33947 212 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 SRYQ05066 204 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 PDK3Q15120 406 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 VMACQ2NL98 169 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 GFOD2Q3B7J2 385 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 PRAMEF20Q5VT98 475 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 NEK10Q6ZWH5 1172 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 PRSS41Q7RTY9 318 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 SLC35F3Q8IY50 421 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 CREB3L4Q8TEY5 395 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 OR5P2Q8WZ92 322 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 MCHR1Q99705 422 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 CDV3Q9UKY7 258 aaKnown RBP10.78□□□□□ -0.68
SNX13-202ENST00000409604 KLHL33A6NCF5 533 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 PIAS2O75928 621 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 ITIH1P19827 911 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 PRDX6P30041 224 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 RPS9P46781 194 aaKnown RBP10.77□□□□□ -0.68
SNX13-202ENST00000409604 POU6F2P78424 691 aaPredicted RBP10.77□□□□□ -0.68
SNX13-202ENST00000409604 BTG2P78543 158 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 ARHGAP19Q14CB8 494 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 MED22Q15528 200 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 TCTE1Q5JU00 501 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 LINC00696Q6ZRV3 163 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 OR56A3Q8NH54 315 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 GIPC3Q8TF64 312 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 TBC1D20Q96BZ9 403 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 IFT27Q9BW83 186 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 POLR2J3Q9H1A7 115 aaKnown RBP10.77□□□□□ -0.68
SNX13-202ENST00000409604 SMOXQ9NWM0 555 aa10.77□□□□□ -0.68
SNX13-202ENST00000409604 OR6B1O95007 311 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 HSD11B2P80365 405 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 PIN1Q13526 163 aaPredicted RBP10.77□□□□□ -0.69
SNX13-202ENST00000409604 TMEM35AQ53FP2 167 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 AHSA2Q719I0 299 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 VWA5B2Q8N398 1253 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 DPP10Q8N608 796 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 DEFB124Q8NES8 71 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 HSPBAP1Q96EW2 488 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 CHRDQ9H2X0 955 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 RLIMQ9NVW2 624 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 LYARQ9NX58 379 aaKnown RBP10.77□□□□□ -0.69
SNX13-202ENST00000409604 NCOR2Q9Y618 2525 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 TMPRSS11DO60235 418 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 ALOX12BO75342 701 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 FUCA1P04066 466 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 KIAA1024LP59773 190 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 CDC42P60953 191 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 NR1D2Q14995 579 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 RANBP3LQ86VV4 465 aaPredicted RBP10.77□□□□□ -0.69
SNX13-202ENST00000409604 CARM1Q86X55 608 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 SLC34A3Q8N130 599 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 AMER3Q8N944 861 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 LINC01555Q8NAE3 123 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 OR52R1Q8NGF1 315 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 GUCD1Q96NT3 240 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 AP3M1Q9Y2T2 418 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 H3BML4 177 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 EMC8O43402 210 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 CLEC3AO75596 197 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 CPMP14384 443 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 CXCR1P25024 350 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 IL12AP29459 219 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 ACADVLP49748 655 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 NOVA1P51513 510 aaKnown RBP10.77□□□□□ -0.69
SNX13-202ENST00000409604 EEFSECP57772 596 aaKnown RBP10.77□□□□□ -0.69
SNX13-202ENST00000409604 TNFAIP8L3Q5GJ75 292 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 IL20RBQ6UXL0 311 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 SH2D5Q6ZV89 423 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 CLVS1Q8IUQ0 354 aaPredicted RBP10.77□□□□□ -0.69
SNX13-202ENST00000409604 SCAIQ8N9R8 606 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 CDS1Q92903 461 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 DAZLQ92904 295 aaKnown RBP10.77□□□□□ -0.69
SNX13-202ENST00000409604 MSANTD3Q96H12 275 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 LDAHQ9H6V9 325 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 PELI2Q9HAT8 420 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 MCM8Q9UJA3 840 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 IKZF2Q9UKS7 526 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 SLC17A4Q9Y2C5 497 aa10.77□□□□□ -0.69
SNX13-202ENST00000409604 TNFRSF10CO14798 259 aa10.76□□□□□ -0.69
SNX13-202ENST00000409604 RAP2AP10114 183 aa10.76□□□□□ -0.69
SNX13-202ENST00000409604 UQCRC2P22695 453 aa10.76□□□□□ -0.69
SNX13-202ENST00000409604 HRH2P25021 359 aa10.76□□□□□ -0.69
SNX13-202ENST00000409604 PKLRP30613 574 aa10.76□□□□□ -0.69
SNX13-202ENST00000409604 EIF1AXP47813 144 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms