RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 OR8K3Q8NH51 312 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 DOK4Q8TEW6 326 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 GFM2Q969S9 779 aaKnown RBP18.88■□□□□ 0.61
PTCD3-202ENST00000409326 CDCP1Q9H5V8 836 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 REEP4Q9H6H4 257 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTCD3-202ENST00000409326 DYNC1I1O14576 645 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 PRKNO60260 465 aaPredicted RBP18.87■□□□□ 0.61
PTCD3-202ENST00000409326 MAN1A2O60476 641 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 C1QL1O75973 258 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 LRATO95237 230 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 LBPP18428 481 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 MLF1P58340 268 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 FUT7Q11130 342 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 PDE7AQ13946 482 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 PTGR1Q14914 329 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 PRSS53Q2L4Q9 553 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 PTRH1Q86Y79 214 aaKnown RBP18.87■□□□□ 0.61
PTCD3-202ENST00000409326 CCDC116Q8IYX3 515 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 BEST3Q8N1M1 668 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 TEX19Q8NA77 164 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 SUN3Q8TAQ9 357 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 STMN3Q9NZ72 180 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 MAT2BQ9NZL9 334 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 ABI3Q9P2A4 366 aa18.87■□□□□ 0.61
PTCD3-202ENST00000409326 DYTNA2CJ06 578 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 MYO1GB0I1T2 1018 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 ZNF195O14628 629 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 AKAP10O43572 662 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 WDPCPO95876 746 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 CLPSP04118 112 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 G6PDP11413 515 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 HPCAL1P37235 193 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 RNF4P78317 190 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 ARG2P78540 354 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 MGAT2Q10469 447 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 MAP4K2Q12851 820 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 NADK2Q4G0N4 442 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 OGFOD2Q6N063 350 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 RNF111Q6ZNA4 994 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 MAVSQ7Z434 540 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 R3HCC1LQ7Z5L2 792 aaKnown RBP18.86■□□□□ 0.61
PTCD3-202ENST00000409326 C9orf40Q8IXQ3 194 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 VWA5B2Q8N398 1253 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 ZNF843Q8N446 348 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 ZNF675Q8TD23 568 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 THAP3Q8WTV1 239 aaPredicted RBP18.86■□□□□ 0.61
PTCD3-202ENST00000409326 HAS2Q92819 552 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 PPCDCQ96CD2 204 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 CTHRC1Q96CG8 243 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 MTERF3Q96E29 417 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 MAELQ96JY0 434 aaKnown RBP18.86■□□□□ 0.61
PTCD3-202ENST00000409326 BBS4Q96RK4 519 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 BRINP2Q9C0B6 783 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 PLA2G3Q9NZ20 509 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 CSAG2Q9Y5P2 127 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 USH1CQ9Y6N9 552 aa18.86■□□□□ 0.61
PTCD3-202ENST00000409326 TMEM200CA6NKL6 621 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 OR6C76A6NM76 312 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 CDK2AP1O14519 115 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 SCAMP2O15127 329 aaKnown RBP18.85■□□□□ 0.61
PTCD3-202ENST00000409326 EPHA3P29320 983 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 NTSP30990 170 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 SSTR4P31391 388 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 MPIP34949 423 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 PTGER1P34995 402 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 SOX18P35713 384 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 RPL3P39023 403 aaKnown RBP18.85■□□□□ 0.61
PTCD3-202ENST00000409326 SLC37A1P57057 533 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 LTB4RQ15722 352 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 ZNF628Q5EBL2 1059 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 SLC6A19Q695T7 634 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 ANKRD26P1Q6NSI1 321 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 FAM111BQ6SJ93 734 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 Q6ZS92 163 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 FAM9CQ8IZT9 166 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 ADCY4Q8NFM4 1077 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 OR7G1Q8NGA0 311 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 OR5L2Q8NGL0 311 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 OR9A2Q8NGT5 310 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 NUBPLQ8TB37 319 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 WDR55Q9H6Y2 383 aaPredicted RBP18.85■□□□□ 0.61
PTCD3-202ENST00000409326 MYOTQ9UBF9 498 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 ATP6V1HQ9UI12 483 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 ZNF639Q9UID6 485 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 ANAPC2Q9UJX6 822 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 CFAP46Q8IYW2 2715 aa18.85■□□□□ 0.61
PTCD3-202ENST00000409326 GOLGA8QA0A0J9YX86 632 aa18.84■□□□□ 0.61
PTCD3-202ENST00000409326 GOLGA8OA6NCC3 632 aa18.84■□□□□ 0.61
PTCD3-202ENST00000409326 OR5H15A6NDH6 313 aa18.84■□□□□ 0.61
PTCD3-202ENST00000409326 GABRR3A8MPY1 467 aa18.84■□□□□ 0.61
PTCD3-202ENST00000409326 GOLGA8NF8WBI6 632 aa18.84■□□□□ 0.61
PTCD3-202ENST00000409326 FCHO1O14526 889 aa18.84■□□□□ 0.61
PTCD3-202ENST00000409326 PDPK1O15530 556 aa18.84■□□□□ 0.61
PTCD3-202ENST00000409326 DDX5P17844 614 aaKnown RBP18.84■□□□□ 0.61
PTCD3-202ENST00000409326 S1PR1P21453 382 aa18.84■□□□□ 0.61
PTCD3-202ENST00000409326 NCBP2P52298 156 aaKnown RBP eCLIP18.84■□□□□ 0.61
PTCD3-202ENST00000409326 DIO3P55073 304 aa18.84■□□□□ 0.61
PTCD3-202ENST00000409326 C21orf58P58505 322 aa18.84■□□□□ 0.61
PTCD3-202ENST00000409326 ZNF385BQ569K4 471 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms