RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ZNF823P16415 610 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 GABRR2P28476 465 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 DLX5P56178 289 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 FLYWCH1Q4VC44 716 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 UBXN11Q5T124 520 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 SH2D5Q6ZV89 423 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 CACUL1Q86Y37 369 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 OR8K3Q8NH51 312 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 PGAP3Q96FM1 320 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-202ENST00000409031 PELOQ9BRX2 385 aaKnown RBP16.89■□□□□ 0.29
SMPD4-202ENST00000409031 C11orf54Q9H0W9 315 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-202ENST00000409031 GPRC5BQ9NZH0 403 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 LRP6O75581 1613 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 KAT7O95251 611 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 RAP2BP61225 183 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 MC1RQ01726 317 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 TAP2Q03519 686 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 BTG3Q14201 252 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-202ENST00000409031 ZNF791Q3KP31 576 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-202ENST00000409031 PXDC1Q5TGL8 231 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 DBF4BQ8NFT6 615 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 OR8S1Q8NH09 359 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 DYNC2LI1Q8TCX1 351 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 C2orf15Q8WU43 125 aaKnown RBP16.89■□□□□ 0.29
SMPD4-202ENST00000409031 HRASLS5Q96KN8 279 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 UBXN10Q96LJ8 280 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 TRMT61BQ9BVS5 477 aaKnown RBP16.89■□□□□ 0.29
SMPD4-202ENST00000409031 MRPL15Q9P015 296 aaKnown RBP16.89■□□□□ 0.29
SMPD4-202ENST00000409031 SGCEO43556 437 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 PPM1BO75688 479 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 DDCP20711 480 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 IDSP22304 550 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 ACVR1BP36896 505 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 TPMTP51580 245 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 EMP3P54852 163 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 RGMBQ6NW40 437 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 SLC5A11Q8WWX8 675 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 A0A0G2JN53 185 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 TCRBV5S1A1TA0A578 114 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 TBC1D3BA6NDS4 549 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 SLC38A8A6NNN8 435 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 ZNF195O14628 629 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 UCHL1P09936 223 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 DAPP51397 102 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 SLC35A2P78381 396 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 SEMG2Q02383 582 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 RAB40BQ12829 278 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 PUM1Q14671 1186 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMPD4-202ENST00000409031 VASH1Q7L8A9 365 aaPredicted RBP16.88■□□□□ 0.29
SMPD4-202ENST00000409031 TMEM185AQ8NFB2 350 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 ANKK1Q8NFD2 765 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 ZFAND1Q8TCF1 268 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 RBPMSQ93062 196 aaKnown RBP16.88■□□□□ 0.29
SMPD4-202ENST00000409031 OR2S2Q9NQN1 319 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 UBR1Q8IWV7 1749 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 CELF2O95319 508 aaKnown RBP16.88■□□□□ 0.29
SMPD4-202ENST00000409031 LIPAP38571 399 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 GP2P55259 537 aaKnown RBP16.88■□□□□ 0.29
SMPD4-202ENST00000409031 MAP2K5Q13163 448 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 CFAP77Q6ZQR2 320 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 FOXRED2Q8IWF2 684 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 NAGSQ8N159 534 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 CNTNAP3BQ96NU0 1288 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 PHPT1Q9NRX4 125 aaPredicted RBP16.88■□□□□ 0.29
SMPD4-202ENST00000409031 A0A1W2PPL8 197 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 F5H5P2 479 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 FARS2O95363 451 aaKnown RBP16.88■□□□□ 0.29
SMPD4-202ENST00000409031 POLR2CP19387 275 aaPredicted RBP16.88■□□□□ 0.29
SMPD4-202ENST00000409031 NDUFV2P19404 249 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 TNFRSF1BP20333 461 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 PIGAP37287 484 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 CSKP41240 450 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 OR7G2Q8NG99 324 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 OR52E4Q8NGH9 312 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 SLCO4A1Q96BD0 722 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 PCYT2Q99447 389 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 PLEKHA1Q9HB21 404 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 MTX2O75431 263 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 FCER2P06734 321 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 MPC1LP0DKB6 136 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 SIGIRRQ6IA17 410 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 CHST9Q7L1S5 443 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 JAGN1Q8N5M9 183 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 BEST4Q8NFU0 473 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 FANK1Q8TC84 345 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 ARL5BQ96KC2 179 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 SUSD3Q96L08 255 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 DPYSL5Q9BPU6 564 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 RDH14Q9HBH5 336 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 WASH6PQ9NQA3 447 aa16.88■□□□□ 0.29
SMPD4-202ENST00000409031 GIFP27352 417 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 ADH6P28332 368 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 ART1P52961 327 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 ARHGAP1Q07960 439 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 POU4F2Q12837 409 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 CLPPQ16740 277 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-202ENST00000409031 PLEKHN1Q494U1 663 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-202ENST00000409031 MYNNQ9NPC7 610 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 OR6C2Q9NZP2 312 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 BTNL2Q9UIR0 455 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms