RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CYP11B1P15538 503 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 TNNI3P19429 210 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 PAICSP22234 425 aaKnown RBP4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 PSMA5P28066 241 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 TMOD1P28289 359 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 CDKL1Q00532 357 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 LRRC74AQ0VAA2 488 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 GPM6BQ13491 265 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 ITPK1Q13572 414 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 KLF5Q13887 457 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 BTG3Q14201 252 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 SLC36A3Q495N2 470 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 GTDC1Q4AE62 458 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 ARHGEF16Q5VV41 709 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 SLC39A4Q6P5W5 647 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 LRRC8BQ6P9F7 803 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 SH2D5Q6ZV89 423 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 PAQR9Q6ZVX9 377 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 ERASQ7Z444 233 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 GOLGA7Q7Z5G4 137 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 VASH2Q86V25 355 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 OR4N5Q8IXE1 308 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 OR5T2Q8NGG2 359 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 SHC3Q92529 594 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 AZIN2Q96A70 460 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 COG3Q96JB2 828 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 MAGED4Q96JG8 741 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 CAPNS2Q96L46 248 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 RBM24Q9BX46 236 aaKnown RBP4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 WDR76Q9H967 626 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 ZNF334Q9HCZ1 680 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 FARSBQ9NSD9 589 aaKnown RBP4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 ATAD3AQ9NVI7 634 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 WIPI2Q9Y4P8 454 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 MAB21L2Q9Y586 359 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 PARD3Q8TEW0 1356 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 STK36Q9NRP7 1315 aa4.21□□□□□ -1.73
HMGB1P13-201ENST00000406019 IGHV4-4A0A075B6R2 117 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 TCP10L2B9ZVM9 353 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 SH2D1BO14796 132 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 SURF4O15260 269 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 GMFGO60234 142 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 TSPAN2O60636 221 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF821O75541 412 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 PALMO75781 387 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 CEACAM4O75871 244 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 STK17BO94768 372 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 CALCAP01258 141 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 FCER2P06734 321 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 CA3P07451 260 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 ASNSP08243 561 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 HMBSP08397 361 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 CAPN2P17655 700 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 GLRA2P23416 452 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 GIFP27352 417 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 PTGFRP43088 359 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 NDST1P52848 882 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 LINC01547P58512 204 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 P2RY14Q15391 338 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 MRGPRG-AS1Q2M3A8 158 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZNF699Q32M78 642 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 MAJINQ3KP22 176 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 ATAD3BQ5T9A4 648 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 NCR3LG1Q68D85 454 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 NIPAL3Q6P499 406 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 CBLN3Q6UW01 205 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 Q6ZRG5 221 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZDHHC21Q8IVQ6 265 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 KLHDC8BQ8IXV7 354 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 LSMEM2Q8N112 164 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 OR5M9Q8NGP3 310 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 RDH11Q8TC12 318 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 SMAP2Q8WU79 429 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 SLC25A36Q96CQ1 311 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 TESK2Q96S53 571 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZSCAN5AQ9BUG6 496 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 NLNQ9BYT8 704 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 TMEM117Q9H0C3 514 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 C3orf14Q9HBI5 128 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 C2orf42Q9NWW7 574 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 CHRNA9Q9UGM1 479 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 B9D1Q9UPM9 204 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 PLCL2Q9UPR0 1127 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 CHMP2BQ9UQN3 213 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 KIF16BQ96L93 1317 aa4.21□□□□□ -1.74
HMGB1P13-201ENST00000406019 A0A0G2JLW4 131 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 XPO1O14980 1071 aaKnown RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 GAS8-AS1O95177 125 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 GOT2P00505 430 aaKnown RBP4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 TPM3P06753 285 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 LYNP07948 512 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 CD48P09326 243 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 IQCF3P0C7M6 154 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 CCDC172P0C7W6 258 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 CLUP10909 449 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 PDHBP11177 359 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 NEFHP12036 1026 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 AXLP30530 894 aa4.2□□□□□ -1.74
HMGB1P13-201ENST00000406019 SLC1A6P48664 564 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms