RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 TMEM39AQ9NV64 488 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 SIRT5Q9NXA8 310 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 OR6C2Q9NZP2 312 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ACSL5Q9ULC5 683 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 STON1Q9Y6Q2 735 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 AP1M2Q9Y6Q5 423 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 A0A1W2PPK0 400 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 KANTRA0A1W2PQU2 76 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 UNCXA6NJT0 531 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 H3BQ06 376 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ARPC5O15511 151 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 CREBL2O60519 120 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 MT-ND5P03915 603 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 LAMP2P13473 410 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ATP1B2P14415 290 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ACPPP15309 386 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 OR1D2P34982 312 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 BDKRB1P46663 353 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TGM3Q08188 693 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TSC22D1Q15714 1073 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ARHGAP15Q53QZ3 475 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 UBXN11Q5T124 520 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 SLC22A10Q63ZE4 541 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 METTL2BQ6P1Q9 378 aaKnown RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TMIGD1Q6UXZ0 262 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 FAM220AQ7Z4H9 259 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TSPAN33Q86UF1 283 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 GLCCI1Q86VQ1 547 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TMEM17Q86X19 198 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ACBD7Q8N6N7 88 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 C3orf58Q8NDZ4 430 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ANKK1Q8NFD2 765 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 MOSPD2Q8NHP6 518 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 HUS1BQ8NHY5 278 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TMEM19Q96HH6 336 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 P2RY13Q9BPV8 354 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 SAP130Q9H0E3 1048 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 METTL17Q9H7H0 456 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 EDARQ9UNE0 448 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 STRCQ7RTU9 1775 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 PRODHO43272 600 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 RAF1P04049 648 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 UQCRC2P22695 453 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 HOXC13P31276 330 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 CLCN7P51798 805 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ACVR1Q04771 509 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 RING1Q06587 406 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 NDUFAF5Q5TEU4 345 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 AGMOQ6ZNB7 445 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 BCDIN3DQ7Z5W3 292 aaKnown RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 MSRB3Q8IXL7 192 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TP53I13Q8NBR0 393 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 OR4C6Q8NH72 309 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TRMT10AQ8TBZ6 339 aaKnown RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 OSTF1Q92882 214 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TMEM169Q96HH4 297 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 OPALINQ96PE5 141 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 BHLHE41Q9C0J9 482 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 NEUROD4Q9HD90 331 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 SLC6A13Q9NSD5 602 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TEX10Q9NXF1 929 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF226Q9NYT6 803 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 SPG21Q9NZD8 308 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 SLC23A1Q9UHI7 598 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ZNFX1Q9P2E3 1918 aaKnown RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 GNB5O14775 395 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 RGS9O75916 674 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 SNAPC5O75971 98 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 HRGP04196 525 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TP53P04637 393 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 RPN2P04844 631 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 PTNP21246 168 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 GRK5P34947 590 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 MAPK9P45984 424 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 KHKP50053 298 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TPMTP51580 245 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ST3GAL3Q11203 375 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 SP140Q13342 867 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 GBX1Q14549 363 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF234Q14588 700 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 PTPRRQ15256 657 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 RPS26P11Q5JNZ5 115 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ZBTB37Q5TC79 503 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 PRPF38BQ5VTL8 546 aaKnown RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF772Q68DY9 489 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TMEM220Q6QAJ8 160 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 IL20RBQ6UXL0 311 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 FRRS1Q6ZNA5 592 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 KRT77Q7Z794 578 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TEX26Q8N6G2 289 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 CREB3L4Q8TEY5 395 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TM9SF4Q92544 642 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ISG20Q96AZ6 181 aaKnown RBP7.04□□□□□ -1.28
HDAC9-202ENST00000405010 PTPN18Q99952 460 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TLR9Q9NR96 1032 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 THSD1Q9NS62 852 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 TMEM30AQ9NV96 361 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 ELOVL2Q9NXB9 296 aa7.04□□□□□ -1.28
HDAC9-202ENST00000405010 SCP2D1Q9UJQ7 156 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms