RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 POLR1CO15160 346 aaPredicted RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 FKBP6O75344 327 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ZNF682O95780 498 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SERPINA1P01009 418 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 HMGN2P05204 90 aaKnown RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 GP1BAP07359 652 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 OR12D1P0DN82 309 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ANPEPP15144 967 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 FBLP22087 321 aaKnown RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 PSMA4P25789 261 aaKnown RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 PPP2R1BP30154 601 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PGDP52209 483 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 MVDP53602 400 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PRR5P85299 388 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 RHDQ02161 417 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 CSRP2Q16527 193 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 LRRC36Q1X8D7 754 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 VMACQ2NL98 169 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 GCNT6Q5T4J0 391 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 LCN8Q6JVE9 175 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 BHLHB9Q6PI77 547 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 RBM44Q6ZP01 1051 aaKnown RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 CALHM3Q86XJ0 350 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PTOV1Q86YD1 416 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ZZZ3Q8IYH5 903 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 HORMAD2Q8N7B1 307 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SLC38A9Q8NBW4 561 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 C11orf65Q8NCR3 313 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 NUP43Q8NFH3 380 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 OR7G2Q8NG99 324 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 FAM110BQ8TC76 370 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ANKRD9Q96BM1 317 aaPredicted RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 ELP4Q96EB1 424 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 NEURL3Q96EH8 262 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 C16orf58Q96GQ5 468 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SLC35G5Q96KT7 338 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PTCHD1Q96NR3 888 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ALOXE3Q9BYJ1 711 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 C3orf14Q9HBI5 128 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 CDC14AQ9UNH5 594 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 AP4S1Q9Y587 144 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 CNTRLQ7Z7A1 2325 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 AQP12BA6NM10 295 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 C5orf58C9J3I9 102 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 UPK1AO00322 258 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 DSCR3O14972 297 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 EMC8O43402 210 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 CREG1O75629 220 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 OPN1SWP03999 348 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 TNNI3P19429 210 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 MATN1P21941 496 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 GZMMP51124 257 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PDX1P52945 283 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 POLE2P56282 527 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 DSTNP60981 165 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SLC34A1Q06495 639 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 VAC14Q08AM6 782 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 FADDQ13158 208 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SCARB2Q14108 478 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 MLC1Q15049 377 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 TBCELQ5QJ74 424 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SAXO2Q658L1 398 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 CPZQ66K79 652 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PACS2Q86VP3 889 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 AQP12AQ8IXF9 295 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ZNF595Q8IYB9 648 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 FAM86B1Q8N7N1 296 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 NFKBIDQ8NI38 313 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SLC9A6Q92581 669 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 MVB12AQ96EY5 273 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 RNF145Q96MT1 663 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 CMKLR1Q99788 373 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 CNPPD1Q9BV87 410 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SEMA6AQ9H2E6 1030 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 OR51I1Q9H343 314 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 MUC13Q9H3R2 512 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 RAD21L1Q9H4I0 556 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PNO1Q9NRX1 252 aaKnown RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 STX18Q9P2W9 335 aaKnown RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 CTSFQ9UBX1 484 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SRPK3Q9UPE1 567 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 TCRBV3S1A0A5B6 114 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TMEM247A6NEH6 219 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 A8MUA0 341 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 H3BNX3 289 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TGFBR3LH3BV60 316 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 HMGN4O00479 90 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 CTNSO60931 367 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 CBFA2T3O75081 653 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TNFRSF21O75509 655 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TIPRLO75663 272 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 PRKD3O94806 890 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 BMP10O95393 424 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 BCHEP06276 602 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 MSL3P1P0C860 447 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ITIH1P19827 911 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 IL10P22301 178 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 PTDSS1P48651 473 aaKnown RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 MAPK10P53779 464 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms