RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 C1orf226A1L170 272 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 SMIM23A6NLE4 172 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 FOXO6A8MYZ6 492 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 E9PLN8 166 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 ULK1O75385 1050 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 ERAL1O75616 437 aaKnown RBP12.28□□□□□ -0.44
SDF4-203ENST00000403997 SHBGP04278 402 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 CT62P0C5K7 136 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 HSD3B1P14060 373 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 CPMP14384 443 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 CHN1P15882 459 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 HSD3B2P26439 372 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 GRNP28799 593 aaKnown RBP12.28□□□□□ -0.44
SDF4-203ENST00000403997 SERPINB3P29508 390 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 PIGAP37287 484 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 FEN1P39748 380 aaKnown RBP12.28□□□□□ -0.44
SDF4-203ENST00000403997 SLCO1A2P46721 670 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 DNASE1L1P49184 302 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 NR0B1P51843 470 aaKnown RBP12.28□□□□□ -0.44
SDF4-203ENST00000403997 EBPQ15125 230 aaKnown RBP12.28□□□□□ -0.44
SDF4-203ENST00000403997 HLA-DQA1Q5Y7H0 255 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 LYPD8Q6UX82 237 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 CD163Q86VB7 1156 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 GALNT12Q8IXK2 581 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 TAGAPQ8N103 731 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 MMP21Q8N119 569 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 TMEM251Q8N6I4 163 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 CCNYL1Q8N7R7 359 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 FAM13CQ8NE31 585 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 OR5M3Q8NGP4 307 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 SPACA9Q96E40 222 aaPredicted RBP12.28□□□□□ -0.44
SDF4-203ENST00000403997 L3HYPDHQ96EM0 354 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 VKORC1Q9BQB6 163 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 FAIM2Q9BWQ8 316 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 PLSCR2Q9NRY7 297 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 PSME2Q9UL46 239 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 STK38LQ9Y2H1 464 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 EML6Q6ZMW3 1958 aa12.28□□□□□ -0.44
SDF4-203ENST00000403997 DNAJC13O75165 2243 aa12.27□□□□□ -0.44
SDF4-203ENST00000403997 ZNF407Q9C0G0 2248 aa12.27□□□□□ -0.44
SDF4-203ENST00000403997 ATP6AP2A0A1C7CYW4 349 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 GOLGA6L10A6NI86 522 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 ADAM10O14672 748 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 GLRA3O75311 464 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 ATP6AP2O75787 350 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 GLSO94925 669 aaPredicted RBP12.27□□□□□ -0.45
SDF4-203ENST00000403997 ESRRBO95718 433 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 CLPSP04118 112 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 ENO1P06733 434 aaKnown RBP12.27□□□□□ -0.45
SDF4-203ENST00000403997 FBXO45P0C2W1 286 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 MYL2P10916 166 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 KRT15P19012 456 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 AGAP20933 346 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 ALDH9A1P49189 494 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 PKNOX1P55347 436 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 TRA2BP62995 288 aaKnown RBP12.27□□□□□ -0.45
SDF4-203ENST00000403997 FUT7Q11130 342 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 FOXO1Q12778 655 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 CSTF3Q12996 717 aaKnown RBP12.27□□□□□ -0.45
SDF4-203ENST00000403997 LCP2Q13094 533 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 SLC10A1Q14973 349 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 PRAMEF20Q5VT98 475 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 SLC48A1Q6P1K1 146 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 ZYG11AQ6WRX3 759 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 TMEM64Q6YI46 380 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 DND1Q8IYX4 353 aaKnown RBP12.27□□□□□ -0.45
SDF4-203ENST00000403997 FAM109AQ8N4B1 249 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 PAQR8Q8TEZ7 354 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 CHTF18Q8WVB6 975 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 TP53INP1Q96A56 240 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 CCDC126Q96EE4 140 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 DMRTA2Q96SC8 542 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 BRINP2Q9C0B6 783 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 OR10A5Q9H207 317 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 LDAHQ9H6V9 325 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 ZDHHC11Q9H8X9 412 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 L2HGDHQ9H9P8 463 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 SH2D2AQ9NP31 389 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 CHST11Q9NPF2 352 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 RYDENQ9NUL5 291 aaKnown RBP12.27□□□□□ -0.45
SDF4-203ENST00000403997 TUBA8Q9NY65 449 aaPredicted RBP12.27□□□□□ -0.45
SDF4-203ENST00000403997 CNIH4Q9P003 139 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 CES1P1Q9UKY3 287 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 TIMM22Q9Y584 194 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 HRH3Q9Y5N1 445 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 ZNF780BQ9Y6R6 833 aa12.27□□□□□ -0.45
SDF4-203ENST00000403997 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.27□□□□□ -0.45
SDF4-203ENST00000403997 CCDC151A5D8V7 595 aa12.26□□□□□ -0.45
SDF4-203ENST00000403997 CAPN14A8MX76 684 aa12.26□□□□□ -0.45
SDF4-203ENST00000403997 NPIPA2E9PIF3 369 aa12.26□□□□□ -0.45
SDF4-203ENST00000403997 NPIPA3F8WFD2 350 aa12.26□□□□□ -0.45
SDF4-203ENST00000403997 PROCP04070 461 aa12.26□□□□□ -0.45
SDF4-203ENST00000403997 CSNK2A2P19784 350 aaPredicted RBP12.26□□□□□ -0.45
SDF4-203ENST00000403997 MAGEA5P43359 124 aa12.26□□□□□ -0.45
SDF4-203ENST00000403997 CCT5P48643 541 aa12.26□□□□□ -0.45
SDF4-203ENST00000403997 HTR6P50406 440 aa12.26□□□□□ -0.45
SDF4-203ENST00000403997 KCNJ2P63252 427 aa12.26□□□□□ -0.45
SDF4-203ENST00000403997 HMGCS1Q01581 520 aa12.26□□□□□ -0.45
SDF4-203ENST00000403997 BTKQ06187 659 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms