RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GALNT7Q86SF2 657 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PRR22Q8IZ63 422 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GABPB2Q8TAK5 448 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ZNF473Q8WTR7 871 aaKnown RBP10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CTHRC1Q96CG8 243 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 WDR34Q96EX3 536 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 COPS7BQ9H9Q2 264 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TEX10Q9NXF1 929 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 FETUBQ9UGM5 382 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 EIF3LQ9Y262 564 aaKnown RBP10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 A0A088AWK7 358 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 A0A1W2PNV4 684 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 NCF1BA6NI72 391 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 NCF1CA8MVU1 366 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CASKO14936 926 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 WISP3O95389 354 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CT62P0C5K7 136 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 NCF1P14598 390 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CPN1P15169 458 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ZNF10P21506 573 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CPN2P22792 545 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CRYGSP22914 178 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GSTM2P28161 218 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SSTR4P31391 388 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CPA2P48052 419 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 KCNC1P48547 511 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 HNRNPH2P55795 449 aaKnown RBP10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SRYQ05066 204 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TBL3Q12788 808 aaKnown RBP10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 RPS6KA2Q15349 733 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 RNASEH2BQ5TBB1 312 aaKnown RBP10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TIGD3Q6B0B8 471 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 VWA1Q6PCB0 445 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 KRT78Q8N1N4 520 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SPATA6LQ8N4H0 392 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ADIPOR1Q96A54 375 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 STARD4Q96DR4 205 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 KCNC2Q96PR1 638 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 UCN2Q96RP3 112 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 EGFL8Q99944 293 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 HEY2Q9UBP5 337 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 MEGF8Q7Z7M0 2845 aa10.8□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PABPN1LA6NDY0 278 aaKnown RBP10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PLAUP00749 431 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TGFB1P01137 390 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CYP4B1P13584 511 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PAX1P15863 534 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ALOX15P16050 662 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CPOXP36551 454 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GMPRP36959 345 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 HSPA7P48741 367 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TAS2R39P59534 338 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SLAMF1Q13291 335 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 E2F2Q14209 437 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 RCN2Q14257 317 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SPRED3Q2MJR0 410 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TBCELQ5QJ74 424 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 HP1BP3Q5SSJ5 553 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 FAM45BPQ6NSW5 357 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 RNF111Q6ZNA4 994 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 DND1Q8IYX4 353 aaKnown RBP10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 FAM45AQ8TCE6 357 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 WNT2BQ93097 391 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CERS2Q96G23 380 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TMEM41AQ96HV5 264 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 MS4A14Q96JA4 679 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 NODALQ96S42 347 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TBCDQ9BTW9 1192 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ZNF717Q9BY31 904 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 OR51B5Q9H339 312 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 EHD1Q9H4M9 534 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 RPF2Q9H7B2 306 aaKnown RBP10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GALNT9Q9HCQ5 603 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ZNF701Q9NV72 531 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 WWOXQ9NZC7 414 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ADGRE2Q9UHX3 823 aa10.79□□□□□ -0.68
SPTLC1P3-201ENST00000403408 YLPM1P49750 1951 aaKnown RBP10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 IQANK1A0A1B0GTG1 560 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GLOD5A6NK44 160 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 C17orf51A8MQB3 221 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TMPRSS11DO60235 418 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SNX4O95219 450 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 THBDP07204 575 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 COX7A2P14406 83 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 FPR1P21462 350 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GGT5P36269 586 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CASP2P42575 452 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 HNMTP50135 292 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 LHX2P50458 406 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GFRA1P56159 465 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TOMM20Q15388 145 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TGFBIQ15582 683 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SPANXN3Q5MJ09 141 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 C10orf62Q5T681 223 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 HEPHL1Q6MZM0 1159 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ANGPTL8Q6UXH0 198 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SLC29A4Q7RTT9 530 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 BTLAQ7Z6A9 289 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TRIM42Q8IWZ5 723 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ST13P4Q8IZP2 240 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms