RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 JUPP14923 745 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 DDCP20711 480 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 CD9P21926 228 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 XPAP23025 273 aaPredicted RBP9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 ZSWIM7Q19AV6 140 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 CEACAM20Q6UY09 585 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 MARCH9Q86YJ5 346 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 NANOGP1Q8N7R0 232 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 LSMEM1Q8N8F7 131 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 MYLIPQ8WY64 445 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 MED28Q9H204 178 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 BRD9Q9H8M2 597 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 C1orf226A1L170 272 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 MTMR11A4FU01 709 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 SH3D21A4FU49 640 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC30A4O14863 429 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 AKAP8O43823 692 aaKnown RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 TRAPPC2P0DI81 140 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 TRAPPC2BP0DI82 140 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 NR2F6P10588 404 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 NSG1P42857 185 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 XCR1P46094 333 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 BDKRB1P46663 353 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 SRP9P49458 86 aaKnown RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 TAS2R50P59544 299 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 PFN3P60673 137 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 B4GALNT1Q00973 533 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 FABP5Q01469 135 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 PUM1Q14671 1186 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 GINS1Q14691 196 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 IDNKQ5T6J7 187 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 C19orf48Q6RUI8 117 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 CHMP1BQ7LBR1 199 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 LRRC70Q7Z2Q7 622 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 LAS2Q8IYD9 372 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 TCTE3Q8IZS6 198 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 WDR48Q8TAF3 677 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 PPCDCQ96CD2 204 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 HTATIP2Q9BUP3 242 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 SEMA3GQ9NS98 782 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 NDUFB11Q9NX14 153 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 LSM2Q9Y333 95 aaKnown RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 CKAP5Q14008 2032 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 FNDC1Q4ZHG4 1894 aaPredicted RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 IQCMA0A1B0GVH7 501 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 NTN1O95631 604 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 IGLV3-27P01718 113 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 HRGP04196 525 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 KLK1P06870 262 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 OR56A5P0C7T3 313 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF81P51508 661 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF767PQ75MW2 155 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 FBXL6Q8N531 539 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 LRRC17Q8N6Y2 441 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 OR52I1Q8NGK6 324 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 AKAP1Q92667 903 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 RIT1Q92963 219 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 NACC2Q96BF6 587 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 NUDT15Q9NV35 164 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF282Q9UDV7 671 aaPredicted RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 GSTK1Q9Y2Q3 226 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 SNTNA6NMZ2 147 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ADAM12O43184 909 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 LANCL1O43813 399 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 NME6O75414 186 aaPredicted RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 STC2O76061 302 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 TP53P04637 393 aaPredicted RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 OSMP13725 252 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 SOX9P48436 509 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 STK19P49842 368 aaPredicted RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 RAE1P78406 368 aaKnown RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ABATP80404 500 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ARHGEF6Q15052 776 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ZMYND11Q15326 602 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF791Q3KP31 576 aaPredicted RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ANXA8L1Q5VT79 327 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 C1orf53Q5VUE5 145 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 KIAA1161Q6NSJ0 714 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ACSM5Q6NUN0 579 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 TRIM40Q6P9F5 258 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 MACC1Q6ZN28 852 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 CREB3L2Q70SY1 520 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 PGBD3Q8N328 593 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 GALNT11Q8NCW6 608 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 OR7G3Q8NG95 312 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 CEP76Q8TAP6 659 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 BTN2A2Q8WVV5 523 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ASB11Q8WXH4 323 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 FUBP3Q96I24 572 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 TBX5Q99593 518 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 WRAP53Q9BUR4 548 aaKnown RBP9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC12A9Q9BXP2 914 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 MVB12BQ9H7P6 319 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC28A3Q9HAS3 691 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 ZC4H2Q9NQZ6 224 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 KLHL21Q9UJP4 597 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 RABL2BQ9UNT1 228 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 CLCA2Q9UQC9 943 aa9.37□□□□□ -0.91
PTCHD4-202ENST00000398738 NCKAP1Q9Y2A7 1128 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms