RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 OR52N2Q8NGI0 321 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 GEMIN6Q8WXD5 167 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 FBXW5Q969U6 566 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 GIMAP5Q96F15 307 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 OPALINQ96PE5 141 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 MARVELD1Q9BSK0 173 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 MCOLN1Q9GZU1 580 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 REEP4Q9H6H4 257 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 RPS10-NUDT3A0A1W2PQS6 291 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 TRBC2A0A5B9 178 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 AGRPO00253 132 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 ENTPD6O75354 484 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 HLA-DQB1P01920 261 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 CKMP06732 381 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 RRASP10301 218 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 HSD3B1P14060 373 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 HOXB1P14653 301 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 HSD3B2P26439 372 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 ALDH9A1P49189 494 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 VEGFBP49765 207 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 UBE3AQ05086 875 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 ZNF33BQ06732 778 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 SLC5A12Q1EHB4 618 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 GLCCI1Q86VQ1 547 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 TRIM69Q86WT6 500 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 CMTM8Q8IZV2 173 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 NEIL2Q969S2 332 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 MSLNLQ96KJ4 702 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 NMNAT1Q9HAN9 279 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 SEC14L4Q9UDX3 406 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 FTSJ1Q9UET6 329 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 CLEC2DQ9UHP7 191 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 LSM7Q9UK45 103 aaKnown RBP15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 CLCA3PQ9Y6N3 262 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 AP1M2Q9Y6Q5 423 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 PRRC2BQ5JSZ5 2229 aaKnown RBP15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 TRAV19A0A0A6YYK7 116 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 FAM240BA0A1B0GVZ2 78 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 FABP7O15540 132 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 TSPAN6O43657 245 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 SOX14O95416 240 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 LGI1O95970 557 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 IFNA7P01567 189 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 SCG5P05408 212 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 IGFBP1P08833 259 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 IMPA1P29218 277 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 PBLDP30039 288 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 CCT3P49368 545 aaKnown RBP15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 CRISP1P54107 249 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 TRIQKQ629K1 86 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 HSD11B1LQ7Z5J1 315 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 LINC00469Q8N7U9 141 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 MYLIPQ8WY64 445 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 PKP4Q99569 1192 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 BHLHE41Q9C0J9 482 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 PIGUQ9H490 435 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 RANBP3Q9H6Z4 567 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 IFT22Q9H7X7 185 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 HHATLQ9HCP6 504 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 C1GALT1Q9NS00 363 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 DNAJC27Q9NZQ0 273 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 FKBP7Q9Y680 259 aa15.17■□□□□ 0.02
CHMP1A-201ENST00000397901 PDE4DIPQ5VU43 2346 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 A0A1W2PQL4 384 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 ZAR1LA6NP61 321 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 KPNA5O15131 536 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 CYP17A1P05093 508 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 FAM157BP0CG42 384 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 MPEG1Q2M385 716 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 FLYWCH1Q4VC44 716 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 FRMPD2BQ6IN97 320 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 SLC39A5Q6ZMH5 540 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 Q6ZVL8 140 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 Q6ZVU0 165 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 COMMD6Q7Z4G1 85 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 DDX53Q86TM3 631 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 SLC44A2Q8IWA5 706 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 WDR48Q8TAF3 677 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 AUTS2Q8WXX7 1259 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 RBPMSQ93062 196 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 UPRTQ96BW1 309 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 ZSWIM3Q96MP5 696 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 MAPKAP1Q9BPZ7 522 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 GALNT9Q9HCQ5 603 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 CNOT2Q9NZN8 540 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 NLKQ9UBE8 527 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 SCML1Q9UN30 329 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 NDRG2Q9UN36 371 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 ALPK3Q96L96 1907 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 NINQ8N4C6 2090 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 LAMA3Q16787 3333 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 WWP2O00308 870 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 PSIP1O75475 530 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 SLCO2B1O94956 709 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 TGFB1P01137 390 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 PSMA1P25786 263 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 LIMS1P48059 325 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 CTSCP53634 463 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 ZNF763Q0D2J5 394 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 C2orf80Q0P641 193 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms