RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 LTB4RQ15722 352 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 VMACQ2NL98 169 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 GLIPR1L2Q4G1C9 344 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 ZNF628Q5EBL2 1059 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 GLYATQ6IB77 296 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 BHLHB9Q6PI77 547 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 TMEM126BQ8IUX1 230 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 SLC38A9Q8NBW4 561 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 OR56A1Q8NGH5 318 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 MIPOL1Q8TD10 442 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 STMN2Q93045 179 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 CTHRC1Q96CG8 243 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 TMEM38AQ9H6F2 299 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 RNPEPL1Q9HAU8 725 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 APMAPQ9HDC9 416 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 PRTFDC1Q9NRG1 225 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 SLC22A11Q9NSA0 550 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 ZCCHC3Q9NUD5 404 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 SPEGQ15772 3267 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 IGLV3-12A0A075B6K2 115 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 A0A087WV62 115 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 TCRBV5S2A0A599 114 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 PLOD3O60568 738 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 KRT36O76013 467 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 BMP10O95393 424 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 NUDT7P0C024 238 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 NCK1P16333 377 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 MC3RP41968 323 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 PRR5P85299 388 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 ID2Q02363 134 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 RBBP4Q09028 425 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 MGAT2Q10469 447 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 SPDYE7PQ495Y7 208 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 MTX3Q5HYI7 312 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 FHL5Q5TD97 284 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 TMEM107Q6UX40 140 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 CYP2R1Q6VVX0 501 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 ZC3H7AQ8IWR0 971 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 ST13P4Q8IZP2 240 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 OR2L13Q8N349 312 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 HIPK4Q8NE63 616 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 SLC26A7Q8TE54 656 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 TMEM121BQ9BXQ6 578 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 RBCK1Q9BYM8 510 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 ASPSCR1Q9BZE9 553 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 TGIF2Q9GZN2 237 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 SERHL2Q9H4I8 314 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 C3orf14Q9HBI5 128 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 S100A14Q9HCY8 104 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 MKKSQ9NPJ1 570 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 PTGFRNQ9P2B2 879 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 TRPC4Q9UBN4 977 aa18.26■□□□□ 0.51
PDLIM2-205ENST00000397761 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 IGKV3D-11A0A0A0MRZ8 115 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 DKK1O94907 266 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 CDK4P11802 303 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 ETFAP13804 333 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 PTGER1P34995 402 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 PCGF2P35227 344 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 CRATP43155 626 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 LIMK1P53667 647 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 POLE2P56282 527 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 BTG2P78543 158 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 TXNL4AP83876 142 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 EEF1A2Q05639 463 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 SLC13A2Q13183 592 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 PRICKLE4Q2TBC4 344 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 ZFP1Q6P2D0 407 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 QSOX2Q6ZRP7 698 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 COX15Q7KZN9 410 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 SPPL2CQ8IUH8 684 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 ADCY4Q8NFM4 1077 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 OR7G2Q8NG99 324 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 COL26A1Q96A83 441 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 GIMAP5Q96F15 307 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 LRGUKQ96M69 825 aa18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 C19orf53Q9UNZ5 99 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-205ENST00000397761 H3BNX3 289 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 UPK1AO00322 258 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 CXCR6O00574 342 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 POLR1CO15160 346 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 JRKO75564 520 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 CCL4P13236 92 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 GALNSP34059 522 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 ERFP50548 548 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 TP53BP2Q13625 1128 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 ERV3-1Q14264 604 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 TRIP6Q15654 476 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 ISXQ2M1V0 245 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 GCNT6Q5T4J0 391 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 ARHGAP40Q5TG30 622 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 C1orf189Q5VU69 101 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 IRAK1BP1Q5VVH5 260 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 ANGPTL8Q6UXH0 198 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 SPATA24Q86W54 205 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 HORMAD2Q8N7B1 307 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 C11orf65Q8NCR3 313 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 C7orf57Q8NEG2 295 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 KAT2AQ92830 837 aa18.24■□□□□ 0.51
PDLIM2-205ENST00000397761 LIN37Q96GY3 246 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms