RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 PRTFDC1Q9NRG1 225 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 THSD1Q9NS62 852 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 ZNF282Q9UDV7 671 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 VPS4AQ9UN37 437 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 C15orf38-AP3S2A0A0A6YYH1 394 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 MEN1O00255 615 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 NME4O00746 187 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 CLDN4O14493 209 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 C1QL1O75973 258 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 C1QCP02747 245 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 CPMP14384 443 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 NQO1P15559 274 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 PORP16435 677 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 MPIP34949 423 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 PGM1P36871 562 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 SLC7A2P52569 658 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 SRSF6Q13247 344 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 CLN3Q13286 438 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 SELPLGQ14242 412 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 RABL3Q5HYI8 236 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 CPZQ66K79 652 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 ZNF621Q6ZSS3 439 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 ARPINQ7Z6K5 226 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 LRRC25Q8N386 305 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 OR8J3Q8NGG0 315 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 KCNE4Q8WWG9 221 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 MCUR1Q96AQ8 359 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 AURKBQ96GD4 344 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 CLPTM1LQ96KA5 538 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 ULBP3Q9BZM4 244 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 TGIF2Q9GZN2 237 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 IKZF5Q9H5V7 419 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 CMTM6Q9NX76 183 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 CTSFQ9UBX1 484 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 PCDHGA3Q9Y5H0 932 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 GMEB1Q9Y692 573 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 SDK2Q58EX2 2172 aa15.87■□□□□ 0.13
TSPAN4-205ENST00000397406 OR2W5A6NFC9 320 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 CFAP73A6NFT4 308 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 C9orf172C9J069 976 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 KLK10O43240 276 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 RBMS1P29558 406 aaKnown RBP15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 PTGER1P34995 402 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 EFNA3P52797 238 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 MTPNP58546 118 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 CXADRP78310 365 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 SLC13A2Q13183 592 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 VWA2Q5GFL6 755 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 PIGGQ5H8A4 983 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 LCN10Q6JVE6 187 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 PGM2L1Q6PCE3 622 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 QSOX2Q6ZRP7 698 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 OVCH1Q7RTY7 1134 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 GPR155Q7Z3F1 870 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 ZFP90Q8TF47 636 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 DPH2Q9BQC3 489 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 ASPSCR1Q9BZE9 553 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 MMADHCQ9H3L0 296 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 AKIRIN1Q9H9L7 192 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 NECTIN3Q9NQS3 549 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 ADA2Q9NZK5 511 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 MMACHCQ9Y4U1 282 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 ATRXP46100 2492 aa15.86■□□□□ 0.13
TSPAN4-205ENST00000397406 MYOCOSA0A1B0GUC4 107 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 CLIC1O00299 241 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 NVLO15381 856 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 ATP1B1P05026 303 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 SLC35E2P0CK97 266 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 MAOAP21397 527 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 UQCRC2P22695 453 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 SLC5A2P31639 672 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 SOX18P35713 384 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 RHAGQ02094 409 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 CEACAM7Q14002 265 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 TGIF1Q15583 401 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 LTB4RQ15722 352 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 ZNF517Q6ZMY9 492 aaPredicted RBP15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 ULK2Q8IYT8 1036 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 CLEC4FQ8N1N0 589 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 ARHGAP24Q8N264 748 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 TRIML2Q8N7C3 387 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 OR9A2Q8NGT5 310 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 STT3BQ8TCJ2 826 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 FKBP10Q96AY3 582 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 SLC35A5Q9BS91 424 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 SPRY4Q9C004 299 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 SLC26A1Q9H2B4 701 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 EPS8L2Q9H6S3 715 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 CD300AQ9UGN4 299 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 PACSIN3Q9UKS6 424 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 ATMQ13315 3056 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 IGKV3D-11A0A0A0MRZ8 115 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 VSTM2BA6NLU5 285 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 CNOT3O75175 753 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 PDE5AO76074 875 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 STK17BO94768 372 aa15.85■□□□□ 0.13
TSPAN4-205ENST00000397406 DLGAP3O95886 979 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms