RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 STT3AP46977 705 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 KHKP50053 298 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 SNRPNP63162 240 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 OCA2Q04671 838 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 MAP4K2Q12851 820 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 C16orf72Q14CZ0 275 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 PRAMEF8Q5VWM4 474 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 PRAMEF7Q5VXH5 474 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 GLYATQ6IB77 296 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 NCLNQ969V3 563 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 CLIP3Q96DZ5 547 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 RSRC1Q96IZ7 334 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 SLC35G5Q96KT7 338 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 MS4A4EQ96PG1 132 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 SLC26A1Q9H2B4 701 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 OLAHQ9NV23 265 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 DDX18Q9NVP1 670 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 DHCR7Q9UBM7 475 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 TRPC4Q9UBN4 977 aa17.85■□□□□ 0.45
TSPAN4-204ENST00000397404 TNFRSF21O75509 655 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 ATP6V1G2O95670 118 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 IFNA14P01570 189 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 KLK3P07288 261 aaPredicted RBP17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 CSRP1P21291 193 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 PSMA4P25789 261 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 PCGF2P35227 344 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 CDK9P50750 372 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 MVDP53602 400 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 DSTNP60981 165 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 INSM1Q01101 510 aaPredicted RBP17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 NKAIN1Q4KMZ8 207 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 ZNF628Q5EBL2 1059 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 DCAF12Q5T6F0 453 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 PWWP2BQ6NUJ5 590 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 B3GNT8Q7Z7M8 397 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 SPATA24Q86W54 205 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 RNF130Q86XS8 419 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 ENDOVQ8N8Q3 282 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 OR9A2Q8NGT5 310 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 SLC26A7Q8TE54 656 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 CTHRC1Q96CG8 243 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 ART5Q96L15 291 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 DGAT2Q96PD7 388 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 DDA1Q9BW61 102 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 PCDHAC1Q9H158 963 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 YY1AP1Q9H869 796 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 RNPEPL1Q9HAU8 725 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 A4GALTQ9NPC4 353 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 C19orf53Q9UNZ5 99 aaPredicted RBP17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 SAMD4AQ9UPU9 718 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 PCDHGA8Q9Y5G5 932 aa17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 NUP214P35658 2090 aaPredicted RBP17.84■□□□□ 0.45
TSPAN4-204ENST00000397404 MUC6Q6W4X9 2439 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 CXCR6O00574 342 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 LDB3O75112 727 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 DKK1O94907 266 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 PSMG1O95456 288 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 C8orf89P0DMQ9 161 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 EFNA1P20827 205 aaPredicted RBP17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 CCNIQ14094 377 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 ISXQ2M1V0 245 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 GALNT12Q8IXK2 581 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 DTWD1Q8N5C7 304 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 FAM156AQ8NDB6 213 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 PLPP5Q8NEB5 264 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 NUP43Q8NFH3 380 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 UGT2B28Q9BY64 529 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 ALOXE3Q9BYJ1 711 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 WDR54Q9H977 334 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 LANCL2Q9NS86 450 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 OCIAD1Q9NX40 245 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 CALML5Q9NZT1 146 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 STX18Q9P2W9 335 aaKnown RBP17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 RPS6KA6Q9UK32 745 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 PACSIN3Q9UKS6 424 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 LIPT1Q9Y234 373 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 ANGPT4Q9Y264 503 aa17.83■□□□□ 0.45
TSPAN4-204ENST00000397404 CCDC187A0A096LP49 1063 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 A8MUI8 341 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 DNAJB6O75190 326 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 PDE9AO76083 593 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 MT-CO3P00414 261 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 FCGR1AP12314 374 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 SLC7A1P30825 629 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 OR1D4P47884 311 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 OR4D2P58180 307 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 PRICKLE4Q2TBC4 344 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.82■□□□□ 0.445e-6■■■■□ 22.8
TSPAN4-204ENST00000397404 TMEM164Q5U3C3 297 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 TMEM107Q6UX40 140 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 ZZZ3Q8IYH5 903 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 LGI4Q8N135 537 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 TMEM52Q8NDY8 209 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 HIPK4Q8NE63 616 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 OR7G1Q8NGA0 311 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 RASSF5Q8WWW0 418 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 UCN3Q969E3 161 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 TAAR9Q96RI9 348 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 YIPF2Q9BWQ6 316 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 ACTRT3Q9BYD9 372 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms