RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 PRAMEF17Q5VTA0 474 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 ZCCHC12Q6PEW1 402 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 TMEM126BQ8IUX1 230 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 SLC30A8Q8IWU4 369 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 OR4N5Q8IXE1 308 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 ZZZ3Q8IYH5 903 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 C10orf111Q8N326 155 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 ENDOVQ8N8Q3 282 aaKnown RBP12.76□□□□□ -0.37
MCF2L-209ENST00000397036 C11orf65Q8NCR3 313 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 PLPP5Q8NEB5 264 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 BHLHE22Q8NFJ8 381 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-209ENST00000397036 STMN2Q93045 179 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 LRGUKQ96M69 825 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 SLC7A5P2Q9GIP4 190 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 FAM86C1Q9NVL1 165 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 C19orf53Q9UNZ5 99 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-209ENST00000397036 IGKV3D-11A0A0A0MRZ8 115 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 A0A1W2PS29 197 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 GDF9O60383 454 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 PSMG1O95456 288 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 ATP6V1G2O95670 118 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 PCGF2P35227 344 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 SOAT1P35610 550 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 SOX18P35713 384 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 STT3AP46977 705 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 RAB15P59190 212 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 DCDP81605 110 aaKnown RBP12.75□□□□□ -0.37
MCF2L-209ENST00000397036 EEF1A2Q05639 463 aaKnown RBP12.75□□□□□ -0.37
MCF2L-209ENST00000397036 MGAT2Q10469 447 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 STX4Q12846 297 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 ELOAQ14241 798 aaKnown RBP12.75□□□□□ -0.37
MCF2L-209ENST00000397036 ZNF630Q2M218 657 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-209ENST00000397036 PRICKLE4Q2TBC4 344 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 NKAIN1Q4KMZ8 207 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.75□□□□□ -0.37
MCF2L-209ENST00000397036 FHL5Q5TD97 284 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 ARHGAP40Q5TG30 622 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 RNF130Q86XS8 419 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 EID3Q8N140 333 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 SLC38A9Q8NBW4 561 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 OR9A2Q8NGT5 310 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 COL26A1Q96A83 441 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 RBM18Q96H35 190 aaKnown RBP12.75□□□□□ -0.37
MCF2L-209ENST00000397036 ALOXE3Q9BYJ1 711 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 ASPSCR1Q9BZE9 553 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 SLC26A1Q9H2B4 701 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 RNPEPL1Q9HAU8 725 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 S100A14Q9HCY8 104 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 SLC22A11Q9NSA0 550 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 ZCCHC3Q9NUD5 404 aaKnown RBP12.75□□□□□ -0.37
MCF2L-209ENST00000397036 OLAHQ9NV23 265 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 TRPC4Q9UBN4 977 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 EGFL7Q9UHF1 273 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 ZNF639Q9UID6 485 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 MAU2Q9Y6X3 613 aa12.75□□□□□ -0.37
MCF2L-209ENST00000397036 UPK1AO00322 258 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 CXCR6O00574 342 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 GSTA4O15217 222 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 ASNA1O43681 348 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 HYAL3O43820 417 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-209ENST00000397036 CPNE3O75131 537 aaKnown RBP12.74□□□□□ -0.37
MCF2L-209ENST00000397036 CREG1O75629 220 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 TIAF1O95411 115 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 MT-CO3P00414 261 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 C1QCP02747 245 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 GPIP06744 558 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 ARAFP10398 606 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 CSRP1P21291 193 aaKnown RBP12.74□□□□□ -0.37
MCF2L-209ENST00000397036 CRATP43155 626 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 POLE2P56282 527 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 SLC13A2Q13183 592 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 SYT16Q17RD7 645 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 COX20Q5RI15 118 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 GCNT6Q5T4J0 391 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 CEACAM20Q6UY09 585 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 CCDC80Q76M96 950 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 COX15Q7KZN9 410 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 OVCH1Q7RTY7 1134 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 ZC3H7AQ8IWR0 971 aaKnown RBP12.74□□□□□ -0.37
MCF2L-209ENST00000397036 SHISA5Q8N114 240 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 CLEC4FQ8N1N0 589 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 NUP43Q8NFH3 380 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 OR5AK3PQ8NH89 298 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 SLC26A7Q8TE54 656 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-209ENST00000397036 HOXB13Q92826 284 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-209ENST00000397036 FKBP10Q96AY3 582 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 NSMCE2Q96MF7 247 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 DEPDC7Q96QD5 511 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 B3GNT4Q9C0J1 378 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 PIF1Q9H611 641 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 CXorf21Q9HAI6 301 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 A4GALTQ9NPC4 353 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 C14orf105Q9NVL8 296 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 GIN1Q9NXP7 522 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 MAT2BQ9NZL9 334 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 STX18Q9P2W9 335 aaKnown RBP12.74□□□□□ -0.37
MCF2L-209ENST00000397036 ACSL6Q9UKU0 697 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 FAF1Q9UNN5 650 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-209ENST00000397036 USP22Q9UPT9 525 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms