RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ALPPP05187 535 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 SERPIND1P05546 499 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 CBSLP0DN79 551 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 PRPH2P23942 346 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 IMPA1P29218 277 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 CBSP35520 551 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 FAM26DQ5JW98 314 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 LYPLAL1Q5VWZ2 237 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 MARCH9Q86YJ5 346 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 C16orf78Q8WTQ4 265 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 POF1BQ8WVV4 589 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 ASZ1Q8WWH4 475 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 PLD4Q96BZ4 506 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 PLA2G12AQ9BZM1 189 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 MRPS7Q9Y2R9 242 aaKnown RBP13.58□□□□□ -0.24
CLIP2-203ENST00000395060 ANHXE9PGG2 379 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 INMT-MINDY4F8WBC2 141 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 GFYI3L273 518 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 RNASET2O00584 256 aaKnown RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 LANCL1O43813 399 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF821O75541 412 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 EPHX1P07099 455 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 H1F0P07305 194 aaKnown RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 PRKAR1AP10644 381 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF250P15622 560 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 ENPP1P22413 925 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SRP9P49458 86 aaKnown RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SMSP52788 366 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SYT14P1Q58G82 188 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 TOR2AQ5JU69 321 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 MED27Q6P2C8 311 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 OXR1Q8N573 874 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 CHTF18Q8WVB6 975 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 ALG14Q96F25 216 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 RIOK2Q9BVS4 552 aaKnown RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SEC14L3Q9UDX4 400 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 HCN2Q9UL51 889 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 CLCA2Q9UQC9 943 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 IQCMA0A1B0GVH7 501 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SLC28A2O43868 658 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 RPLP2P05387 115 aaKnown RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 NR2F6P10588 404 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 RNF144AP50876 292 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 MANFP55145 182 aaKnown RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 FCN2Q15485 313 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SYPL1Q16563 259 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 CRB2Q5IJ48 1285 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 IDNKQ5T6J7 187 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF770Q6IQ21 691 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 ANKRD54Q6NXT1 300 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 HSD11B1LQ7Z5J1 315 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 OR4M2Q8NGB6 313 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SORCS1Q8WY21 1168 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 RNFT2Q96EX2 444 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 MSANTD3Q96H12 275 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 C1QTNF6Q9BXI9 259 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 KLF16Q9BXK1 252 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 GON7Q9BXV9 100 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 NLNQ9BYT8 704 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SUV39H2Q9H5I1 410 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 THSD1Q9NS62 852 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 CNIH4Q9P003 139 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SRRDQ9UH36 339 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SLC9A8Q9Y2E8 581 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 KCNE2Q9Y6J6 123 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 LOC105369274A0A096LPK9 316 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 GLOD5A6NK44 160 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SLC30A4O14863 429 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 MPZL2O60487 215 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 PDE9AO76083 593 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 IFNA14P01570 189 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 INHAP05111 366 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 FURINP09958 794 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 AGFG1P52594 562 aaKnown RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 TBPL1P62380 186 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 MLLT11Q13015 90 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-203ENST00000395060 PGBD2Q6P3X8 592 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 PODNL1Q6PEZ8 512 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 OR4N4Q8N0Y3 316 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 GDPD1Q8N9F7 314 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 DCAF4L2Q8NA75 395 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 PROKR2Q8NFJ6 384 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 KLK6Q92876 244 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 SCRN2Q96FV2 425 aa13.57□□□□□ -0.24
CLIP2-203ENST00000395060 LEUTXA8MZ59 168 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 TEX46H3BTG2 121 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 AKAP8O43823 692 aaKnown RBP13.56□□□□□ -0.24
CLIP2-203ENST00000395060 ARHGEF15O94989 841 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 SPINT3P49223 89 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 DGKGP49619 791 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 TJAP1Q5JTD0 557 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 REEP3Q6NUK4 255 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 RNF165Q6ZSG1 346 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 OR8J1Q8NGP2 316 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 SENP5Q96HI0 755 aaPredicted RBP13.56□□□□□ -0.24
CLIP2-203ENST00000395060 CASD1Q96PB1 797 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 SLAMF7Q9NQ25 335 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 218.8 ms