RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 POM121CA8CG34 1229 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 FZD6O60353 706 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 POP4O95707 220 aaKnown RBP12.57□□□□□ -0.4
NFKB1-202ENST00000394820 PRR35P0CG20 571 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 LAG3P18627 525 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 CCR2P41597 374 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 TBPL1P62380 186 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 CAMK1Q14012 370 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 ASTLQ6HA08 431 aaPredicted RBP12.57□□□□□ -0.4
NFKB1-202ENST00000394820 C17orf64Q86WR6 236 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 OR52P1PQ8NH57 321 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 SECISBP2Q96T21 854 aaKnown RBP12.57□□□□□ -0.4
NFKB1-202ENST00000394820 BCL7BQ9BQE9 202 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 REEP4Q9H6H4 257 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 ENOPH1Q9UHY7 261 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 CDV3Q9UKY7 258 aaKnown RBP12.57□□□□□ -0.4
NFKB1-202ENST00000394820 OR51B4Q9Y5P0 310 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 SNX11Q9Y5W9 270 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 CLDN24A6NM45 220 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 PSMD9O00233 223 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 YY2O15391 372 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 HOXC11O43248 304 aaPredicted RBP12.57□□□□□ -0.4
NFKB1-202ENST00000394820 CRYZL1O95825 349 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 RLN1P04808 185 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 CD6P30203 668 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF763Q0D2J5 394 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 FCHO2Q0JRZ9 810 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 FAM205BPQ63HN1 556 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 SFRP4Q6FHJ7 346 aaPredicted RBP12.57□□□□□ -0.4
NFKB1-202ENST00000394820 CNKSR3Q6P9H4 555 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 HSD11B1LQ7Z5J1 315 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 PTOV1Q86YD1 416 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 AP3S1Q92572 193 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 ALG14Q96F25 216 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 HRASLS5Q96KN8 279 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 ABCG4Q9H172 646 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 EGLN3Q9H6Z9 239 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 RNF121Q9H920 327 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 TMEM138Q9NPI0 162 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 SLC52A3Q9NQ40 469 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 GRM6O15303 877 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 ICMTO60725 284 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 DHFRP00374 187 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 SYPP08247 313 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 TIA1P31483 386 aaKnown RBP eCLIP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 HTR3AP46098 478 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 LSM11P83369 360 aaKnown RBP eCLIP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF91Q05481 1191 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 SYPL1Q16563 259 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 WDR45BQ5MNZ6 344 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 GDPD4Q6W3E5 623 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 TCEAL8Q8IYN2 117 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 BOLLQ8N9W6 283 aaKnown RBP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 SCRN2Q96FV2 425 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 TXNDC15Q96J42 360 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 TEFMQ96QE5 360 aaKnown RBP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 FBXO8Q9NRD0 319 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 ENAMQ9NRM1 1142 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 KLHL28Q9NXS3 571 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 NLRC5Q86WI3 1866 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 FAM170BA6NMN3 283 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 J3QLW9 94 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 DNAJB5O75953 348 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 ADH1AP07327 375 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF19P17023 458 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 CTNNB1P35222 781 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 NCBP2P52298 156 aaKnown RBP eCLIP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 RPS25P62851 125 aaKnown RBP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 STX4Q12846 297 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 TBCEQ15813 527 aaPredicted RBP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 REEP3Q6NUK4 255 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 POMZP3Q6PJE2 187 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 GRASPQ7Z6J2 395 aaPredicted RBP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 CCDC28AQ8IWP9 274 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 C12orf76Q8N812 135 aaPredicted RBP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 CYB561A3Q8NBI2 242 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 OR4K5Q8NGD3 323 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 NTMT1Q9BV86 223 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 MND1Q9BWT6 205 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 KDM4BO94953 1096 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 MAPK8P45983 427 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 CCR4P51679 360 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 TMEM115Q12893 351 aaPredicted RBP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 GPR68Q15743 365 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 FNDC3BQ53EP0 1204 aaKnown RBP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 PJA1Q8NG27 643 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 ZCCHC10Q8TBK6 192 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 EFHD2Q96C19 240 aaPredicted RBP12.56□□□□□ -0.4
NFKB1-202ENST00000394820 CCDC115Q96NT0 180 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 NUDT15Q9NV35 164 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 RDH8Q9NYR8 311 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 SEC14L4Q9UDX3 406 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 PRUNE2Q8WUY3 3088 aa12.56□□□□□ -0.4
NFKB1-202ENST00000394820 MMP20O60882 483 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 CD3GP09693 182 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 CBLP22681 906 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 BMPR1AP36894 532 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 SLC9A3P48764 834 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 B4GALNT1Q00973 533 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms