RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 FAM3CQ92520 227 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ISL2Q96A47 359 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SLCO4A1Q96BD0 722 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SLC22A18Q96BI1 424 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 S100PBPQ96BU1 408 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 PDLIM5Q96HC4 596 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 UBXN10Q96LJ8 280 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 KCTD7Q96MP8 289 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SLC12A9Q9BXP2 914 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 DPAGT1Q9H3H5 408 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 MEAF6Q9HAF1 191 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SLAMF7Q9NQ25 335 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SEC14L4Q9UDX3 406 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 KCNK6Q9Y257 313 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ZNF175Q9Y473 711 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 LCTP09848 1927 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 BRWD1Q9NSI6 2320 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ALPLP05186 524 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TRAPPC2P0DI81 140 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TRAPPC2BP0DI82 140 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CAPN3P20807 821 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CBLP22681 906 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 FNTBP49356 437 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CENPAP49450 140 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 EPHA5P54756 1037 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 MLLT10P55197 1068 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 GP2P55259 537 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 SH3BP2P78314 561 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ADARB1P78563 741 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 EIF4EBP2Q13542 120 aaPredicted RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 PCBP2Q15366 365 aaKnown RBP eCLIP5.43□□□□□ -1.542e-11■□□□□ 9.2
RFFL-202ENST00000394597 TEAD4Q15561 434 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 GRK1Q15835 563 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 AAK1Q2M2I8 961 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 HES5Q5TA89 166 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ZNF852Q6ZMS4 543 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TMEM150AQ86TG1 271 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 IL17RDQ8NFM7 739 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 DNAJB8Q8NHS0 232 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 PIGKQ92643 395 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ELSPBP1Q96BH3 223 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 DTD2Q96FN9 168 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 FAM83CQ9BQN1 747 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 RSPH9Q9H1X1 276 aaPredicted RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 RHBGQ9H310 441 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 MRPS30Q9NP92 439 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 EVA1BQ9NVM1 165 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TAS2R7Q9NYW3 318 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 GULP1Q9UBP9 304 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 PCDHB14Q9Y5E9 798 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CFAP20Q9Y6A4 193 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 PRSS21Q9Y6M0 314 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CXorf51AA0A1B0GTR3 108 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 OR14I1A6ND48 311 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 WASHC1A8K0Z3 465 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ZNF879B4DU55 563 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 TOR1AO14656 332 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 FGF4P08620 206 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 FPR1P21462 350 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 SSTR4P31391 388 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 SOX9P48436 509 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 MANFP55145 182 aaKnown RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 RPP38P78345 283 aaKnown RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 GRB7Q14451 532 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 DPY19L1Q2PZI1 675 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 FAM174BQ3ZCQ3 159 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 IQCCQ4KMZ1 466 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CTSL3PQ5NE16 218 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 LIPJQ5W064 366 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CDC73Q6P1J9 531 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 TRIM40Q6P9F5 258 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ADIPOR2Q86V24 386 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CYP4Z1Q86W10 505 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 FAM217AQ8IXS0 508 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 OR4A15Q8NGL6 344 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 OR2T35Q8NGX2 323 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 SP7Q8TDD2 431 aaPredicted RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 SLC13A3Q8WWT9 602 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CREB3L1Q96BA8 519 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ART5Q96L15 291 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ZFP3Q96NJ6 502 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 EBPLQ9BY08 206 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 KCNN2Q9H2S1 579 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 GSTO2Q9H4Y5 243 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CAPN10Q9HC96 672 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 SOHLH2Q9NX45 425 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 COMMD9Q9P000 198 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 PCTPQ9UKL6 214 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 MAN2B2Q9Y2E5 1009 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 SPIN1Q9Y657 262 aaPredicted RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 KNL1Q8NG31 2342 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 TDRD15B5MCY1 1934 aaKnown RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 FXYD6-FXYD2A0A087WZ82 144 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 KRBOX1C9JBD0 128 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CAPN5O15484 640 aaPredicted RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 GPR39O43194 453 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 LYRM1O43325 122 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 KCNJ13O60928 360 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ERAL1O75616 437 aaKnown RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 UGT2B17O75795 530 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms