RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 TREX2Q9BQ50 279 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-203ENST00000394181 WFDC6Q9BQY6 131 aa17.91■□□□□ 0.46
CLDND1-203ENST00000394181 PADI2Q9Y2J8 665 aa17.91■□□□□ 0.46
CLDND1-203ENST00000394181 A0A0A6YYC8 382 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 I3L1I5 382 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 HS6ST1O60243 411 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 SEC24DO94855 1032 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 FHP07954 510 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 ZNF10P21506 573 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 MYF6P23409 242 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 TLX1P31314 330 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 POLR2IP36954 125 aaKnown RBP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 GABRA4P48169 554 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 ITGA1P56199 1179 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 PUM1Q14671 1186 aaKnown RBP eCLIP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 PRTGQ2VWP7 1150 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 AMZ1Q400G9 498 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 IFI44LQ53G44 452 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 CYP4Z1Q86W10 505 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 Q8N9G6 341 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 GPR32P1Q8NGA4 272 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 TCTN2Q96GX1 697 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 RBCK1Q9BYM8 510 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 AMBRA1Q9C0C7 1298 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 ZSCAN32Q9NX65 697 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 TMEM9Q9P0T7 183 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 SAMHD1Q9Y3Z3 626 aaKnown RBP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 TESMINQ9Y4I5 508 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 TMEM131Q92545 1883 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 EMC8O43402 210 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 MFN2O95140 757 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 ATXN8OSP0DMR3 200 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 HOXB6P17509 224 aaKnown RBP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 HOXA6P31267 233 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 PIGAP37287 484 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 FOXD4Q12950 439 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-203ENST00000394181 KRT80Q6KB66 452 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 USP53Q70EK8 1073 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 GATAD2AQ86YP4 633 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 SFXN5Q8TD22 340 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 GIMAP5Q96F15 307 aa17.9■□□□□ 0.46
CLDND1-203ENST00000394181 ASXL3Q9C0F0 2248 aa17.89■□□□□ 0.46
CLDND1-203ENST00000394181 B4GAT1O43505 415 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 FOXS1O43638 330 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 NR2F1P10589 423 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 CD247P20963 164 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 RRM2P31350 389 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 DAPP51397 102 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 TRMT12Q53H54 448 aaKnown RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 ZC3H12BQ5HYM0 836 aaKnown RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 GALNT5Q7Z7M9 940 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 PATL1Q86TB9 770 aaKnown RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 COMTD1Q86VU5 262 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 SDR16C5Q8N3Y7 309 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 LZICQ8WZA0 190 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 RBM4BQ9BQ04 359 aaKnown RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 RBM4Q9BWF3 364 aaKnown RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 MS4A12Q9NXJ0 267 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 USE1Q9NZ43 259 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 PDP1Q9P0J1 537 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 CHST10O43529 356 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 HPRP00739 348 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 ALBP02768 609 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 CHRM4P08173 479 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 CPMP14384 443 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 DNAJA1P31689 397 aaKnown RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 MAN2A2P49641 1150 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 CSTF1Q05048 431 aaKnown RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 PMS2CLQ68D20 193 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 USP51Q70EK9 711 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 HIPK1Q86Z02 1210 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 ARL10Q8N8L6 244 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 OR56A1Q8NGH5 318 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 OR52J3Q8NH60 311 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 MUS81Q96NY9 551 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 ELF4Q99607 663 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 IER2Q9BTL4 223 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 SPRTNQ9H040 489 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 ERVMER34-1Q9H9K5 563 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 SOHLH2Q9NX45 425 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 THUMPD1Q9NXG2 353 aaKnown RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 HCN3Q9P1Z3 774 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 CLCA2Q9UQC9 943 aa17.89■□□□□ 0.45
CLDND1-203ENST00000394181 TP53BP1Q12888 1972 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-203ENST00000394181 IGHV1OR21-1A0A087WYE8 117 aa17.88■□□□□ 0.45
CLDND1-203ENST00000394181 OR2W5A6NFC9 320 aa17.88■□□□□ 0.45
CLDND1-203ENST00000394181 MLLT3P42568 568 aaPredicted RBP17.88■□□□□ 0.45
CLDND1-203ENST00000394181 PRR5P85299 388 aa17.88■□□□□ 0.45
CLDND1-203ENST00000394181 MAT1AQ00266 395 aaKnown RBP17.88■□□□□ 0.45
CLDND1-203ENST00000394181 ELOAQ14241 798 aaKnown RBP17.88■□□□□ 0.45
CLDND1-203ENST00000394181 SYT16Q17RD7 645 aa17.88■□□□□ 0.45
CLDND1-203ENST00000394181 ARMC8Q8IUR7 673 aa17.88■□□□□ 0.45
CLDND1-203ENST00000394181 SLC30A8Q8IWU4 369 aa17.88■□□□□ 0.45
CLDND1-203ENST00000394181 METTL27Q8N6F8 245 aaPredicted RBP17.88■□□□□ 0.45
CLDND1-203ENST00000394181 COL21A1Q96P44 957 aa17.88■□□□□ 0.45
CLDND1-203ENST00000394181 OR7D2Q96RA2 312 aa17.88■□□□□ 0.45
CLDND1-203ENST00000394181 QRSL1Q9H0R6 528 aaKnown RBP17.88■□□□□ 0.45
CLDND1-203ENST00000394181 REEP1Q9H902 201 aa17.88■□□□□ 0.45
CLDND1-203ENST00000394181 ANKHQ9HCJ1 492 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms