RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ADAP00813 363 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 OR12D1P0DN82 309 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 BIKQ13323 160 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 MBTPS1Q14703 1052 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 GRIN2CQ14957 1233 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 NDUFA9Q16795 377 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 ZMAT1Q5H9K5 638 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 RAB12Q6IQ22 244 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 ARID1BQ8NFD5 2236 aaPredicted RBP13.59□□□□□ -0.23
RTF1-201ENST00000389629 OR4K5Q8NGD3 323 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 OR5J2Q8NH18 312 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 PCDHGA6Q9Y5G7 932 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 LTBP3Q9NS15 1303 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 KANTRA0A1W2PQU2 76 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 ANXA2P2A6NMY6 339 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 SSX4O60224 188 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 ANXA2P07355 339 aaKnown RBP13.58□□□□□ -0.23
RTF1-201ENST00000389629 CD3GP09693 182 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 MAP4K2Q12851 820 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 ARSIQ5FYB1 569 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 IL20RBQ6UXL0 311 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 MAP6Q96JE9 813 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 SLC12A9Q9BXP2 914 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 KCNK12Q9HB15 430 aa13.58□□□□□ -0.23
RTF1-201ENST00000389629 RC3H2Q9HBD1 1191 aaKnown RBP13.58□□□□□ -0.23
RTF1-201ENST00000389629 ARPC4-TTLL3A0A0A6YYG9 625 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 ATP6V1G2-DDX39BF2Z307 99 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 C8orf89P0DMQ9 161 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 ARSBP15848 533 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 SELPP16109 830 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 CHMP24386 653 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 DBPQ10586 325 aaPredicted RBP13.58□□□□□ -0.24
RTF1-201ENST00000389629 TMIGD1Q6UXZ0 262 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 AUTS2Q8WXX7 1259 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 TESCQ96BS2 214 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 MNTQ99583 582 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 THAP7Q9BT49 309 aaPredicted RBP13.58□□□□□ -0.24
RTF1-201ENST00000389629 ARHGAP39Q9C0H5 1083 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 POLHQ9Y253 713 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 CFAP20Q9Y6A4 193 aaKnown RBP13.58□□□□□ -0.24
RTF1-201ENST00000389629 GABRR3A8MPY1 467 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 RPP14O95059 124 aaKnown RBP13.58□□□□□ -0.24
RTF1-201ENST00000389629 ALDOBP05062 364 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 IL32P24001 234 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 KHKP50053 298 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 P2RX3P56373 397 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 POU6F2P78424 691 aaPredicted RBP13.58□□□□□ -0.24
RTF1-201ENST00000389629 ZNF91Q05481 1191 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 MRPL10Q7Z7H8 261 aaKnown RBP13.58□□□□□ -0.24
RTF1-201ENST00000389629 GJD3Q8N144 294 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 OR52P1PQ8NH57 321 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 TANKQ92844 425 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 PDLIM5Q96HC4 596 aaKnown RBP13.58□□□□□ -0.24
RTF1-201ENST00000389629 FKBP14Q9NWM8 211 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 SOCS5O75159 536 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 KCNK5O95279 499 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 ACPPP15309 386 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 RRAS2P62070 204 aaPredicted RBP13.58□□□□□ -0.24
RTF1-201ENST00000389629 PRR5P85299 388 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 IFITM3Q01628 133 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 PRSS36Q5K4E3 855 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 PRAMEF14Q5SWL7 426 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 PRAMEF13Q5VWM6 474 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 ELP2Q6IA86 826 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 CAMK1GQ96NX5 476 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 RBFOX1Q9NWB1 397 aaKnown RBP13.58□□□□□ -0.24
RTF1-201ENST00000389629 KIAA1217Q5T5P2 1943 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 DOCK5Q9H7D0 1870 aa13.58□□□□□ -0.24
RTF1-201ENST00000389629 TAPBPO15533 448 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 FLRT2O43155 660 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 SMAD6O43541 496 aaKnown RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 BMP1P13497 986 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 TLX1P31314 330 aaPredicted RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 PYCR1P32322 319 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 SLC19A1P41440 591 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 GBX2P52951 348 aaPredicted RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 FCN2Q15485 313 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 RTP2Q5QGT7 225 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 YAF2Q8IY57 180 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 OR52N2Q8NGI0 321 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 NKD1Q969G9 470 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 CIDECQ96AQ7 238 aaPredicted RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 CARS2Q9HA77 564 aaKnown RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 OR6C2Q9NZP2 312 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 PLAGL1Q9UM63 463 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 LOC100509620A0A075B734 347 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 DISC1C4P0D8 188 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 RTCAO00442 366 aaKnown RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 ARPC5O15511 151 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 EDNRAP25101 427 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 GIFP27352 417 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 PCGF2P35227 344 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 NRIP1P48552 1158 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 YBX1P67809 324 aaKnown RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 SMUG1Q53HV7 270 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 TOR1AIP1Q5JTV8 583 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 C22orf39Q6P5X5 142 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 RTL4Q6ZR62 310 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 BOLLQ8N9W6 283 aaKnown RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 ZC3H10Q96K80 434 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms