RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 PTGER3P43115 390 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 XCR1P46094 333 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 VSX2P58304 361 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 RGNQ15493 299 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 HSD17B12Q53GQ0 312 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 ZRANB3Q5FWF4 1079 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 ZNF770Q6IQ21 691 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 CEACAM20Q6UY09 585 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 CIR1Q86X95 450 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 STPG2Q8N412 459 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 KCT2Q8NC54 265 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 DPYSL5Q9BPU6 564 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 APOL5Q9BWW9 433 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 ZYG11BQ9C0D3 744 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 RSPH9Q9H1X1 276 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 ABCG5Q9H222 651 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 P2RY12Q9H244 342 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 NMNAT1Q9HAN9 279 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 FANCFQ9NPI8 374 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 HCN3Q9P1Z3 774 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 FAM8A1Q9UBU6 413 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 DOCK4Q8N1I0 1966 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 MYO16Q9Y6X6 1858 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 C2orf81A6NN90 581 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 NCR1O76036 304 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 SMSP52788 366 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 DCDC1P59894 354 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 EFEMP1Q12805 493 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 TPBGQ13641 420 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 SPIN4Q56A73 249 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 NOXRED1Q6NXP6 359 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 RRM2BQ7LG56 351 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 OR52I1Q8NGK6 324 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 MS4A3Q96HJ5 214 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 FAM126AQ9BYI3 521 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 FAM120CQ9NX05 1096 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 SCP2D1Q9UJQ7 156 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 LOC105369274A0A096LPK9 316 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 GABRR3A8MPY1 467 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 HEPACAM2A8MVW5 462 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 UPK3BL1B0FP48 263 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 UPK3BL2E5RIL1 263 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 GADD45GO95257 159 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 LDOC1O95751 146 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 IGFBP1P08833 259 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 SULT1A3P0DMM9 295 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 SULT1A4P0DMN0 295 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 TFPIP10646 304 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 PRPH2P23942 346 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 MAOBP27338 520 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 HOXA1P49639 335 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 PTPN5P54829 565 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 AP1S2P56377 157 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 DSG2Q14126 1118 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 ZNF235Q14590 738 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 OTOP2Q7RTS6 562 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 OR4N4Q8N0Y3 316 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 PIAS4Q8N2W9 510 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 UBTD2Q8WUN7 234 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 TCF25Q9BQ70 676 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 BRD7Q9NPI1 651 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 HPF1Q9NWY4 346 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 TRPM5Q9NZQ8 1165 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 REV1Q9UBZ9 1251 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 PPIEQ9UNP9 301 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 TEX13CA0A0J9YWL9 993 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 G3V3Q6 166 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 LGALS8O00214 317 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 CASC3O15234 703 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 AMD1P17707 334 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 EPORP19235 508 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 LPOP22079 712 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 ACVRL1P37023 503 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 GSTM5P46439 218 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 SERINC3Q13530 473 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 ELOAQ14241 798 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 ETFDHQ16134 617 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 RAET1GQ6H3X3 334 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 MZT2AQ6P582 158 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 UXS1Q8NBZ7 420 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 OR8J2Q8NGG1 315 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 FANK1Q8TC84 345 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 AHCYL2Q96HN2 611 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 SERPINB11Q96P15 392 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 THAP7Q9BT49 309 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 GPR62Q9BZJ7 368 aa13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 ZNF436Q9C0F3 470 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-201ENST00000389386 C1orf226A1L170 272 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 C2orf78A6NCI8 922 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 ARRDC5A6NEK1 342 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 GMDSO60547 372 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 SOD1P00441 154 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 HMGN1P05114 100 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 LAMP1P11279 417 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 COX7A2P14406 83 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 PCSK2P16519 638 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 ELK1P19419 428 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 PRMT2P55345 433 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 CSTF1Q05048 431 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 GANABQ14697 944 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms