RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 YIPF6Q96EC8 236 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 USE1Q9NZ43 259 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 MYO10Q9HD67 2058 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 TRIOBPQ9H2D6 2365 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 TRBC2A0A5B9 178 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 ISM1B1AKI9 464 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 TMEM229AB2RXF0 380 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 C4orf51C9J302 202 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 PRKRAO75569 313 aaKnown RBP13.51□□□□□ -0.25
CLCN4-201ENST00000380829 CLEC3AO75596 197 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 PTTG1O95997 202 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 HOXB6P17509 224 aaKnown RBP13.51□□□□□ -0.25
CLCN4-201ENST00000380829 TNFRSF1BP20333 461 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 FMO3P31513 532 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 GRK3P35626 688 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 MANFP55145 182 aaKnown RBP13.51□□□□□ -0.25
CLCN4-201ENST00000380829 KCNJ10P78508 379 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 MLLT1Q03111 559 aaPredicted RBP13.51□□□□□ -0.25
CLCN4-201ENST00000380829 CCINQ13939 588 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 SCARB2Q14108 478 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 TEAD4Q15561 434 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 KIAA1614Q5VZ46 1190 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 OR4C11Q6IEV9 310 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 SHQ1Q6PI26 577 aaKnown RBP13.51□□□□□ -0.25
CLCN4-201ENST00000380829 Q6ZS52 159 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 FRMD1Q8N878 549 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 DENND6BQ8NEG7 585 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 ZNF555Q8NEP9 628 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 LCN9Q8WX39 176 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 QRFPRQ96P65 431 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 TM9SF3Q9HD45 589 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 C1GALT1Q9NS00 363 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 ZNF624Q9P2J8 865 aaPredicted RBP13.51□□□□□ -0.25
CLCN4-201ENST00000380829 MMP17Q9ULZ9 603 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 NAALAD2Q9Y3Q0 740 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 COLEC10Q9Y6Z7 277 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 LRRC72A6NJI9 287 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 WASHC1A8K0Z3 465 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 PDPK1O15530 556 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 MITFO75030 526 aaPredicted RBP13.5□□□□□ -0.25
CLCN4-201ENST00000380829 HOXC4P09017 264 aaPredicted RBP13.5□□□□□ -0.25
CLCN4-201ENST00000380829 CD6P30203 668 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 MASP1P48740 699 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 TRIM40Q6P9F5 258 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 WASH2PQ6VEQ5 465 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 GALNT5Q7Z7M9 940 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 AMIGO1Q86WK6 493 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 HIPK1Q86Z02 1210 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 PJA1Q8NG27 643 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 FAM3CQ92520 227 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 COQ7Q99807 217 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 TTYH1Q9H313 450 aaPredicted RBP13.5□□□□□ -0.25
CLCN4-201ENST00000380829 KIR3DX1Q9H7L2 352 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 TMEFF2Q9UIK5 374 aaPredicted RBP13.5□□□□□ -0.25
CLCN4-201ENST00000380829 HEBP2Q9Y5Z4 205 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 ERI3O43414 337 aaKnown RBP13.5□□□□□ -0.25
CLCN4-201ENST00000380829 IL1RL1Q01638 556 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 HYAL2Q12891 473 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 FADDQ13158 208 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 COL19A1Q14993 1142 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 CYP27C1Q4G0S4 372 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 TTC23Q5W5X9 447 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 DNASE1L2Q92874 299 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 LGALS12Q96DT0 336 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 ZHX1-C8orf76Q96EF9 292 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 MAP6Q96JE9 813 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 NLNQ9BYT8 704 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 DDX31Q9H8H2 851 aaKnown RBP13.5□□□□□ -0.25
CLCN4-201ENST00000380829 TMEM184CQ9NVA4 438 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 OSGIN1Q9UJX0 560 aa13.5□□□□□ -0.25
CLCN4-201ENST00000380829 SAMHD1Q9Y3Z3 626 aaKnown RBP13.5□□□□□ -0.25
CLCN4-201ENST00000380829 A0A0A6YYD5 115 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 AGAP5A6NIR3 686 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 GLOD5A6NK44 160 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 MEN1O00255 615 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 CDK2AP1O14519 115 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 CHRM5P08912 532 aaPredicted RBP13.49□□□□□ -0.25
CLCN4-201ENST00000380829 UQCRC2P22695 453 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 OR2B6P58173 313 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 ISL1P61371 349 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 CDK6Q00534 326 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 EPS8Q12929 822 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 Q5BKY6 102 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 LAIR1Q6GTX8 287 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 CYP4Z1Q86W10 505 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 TTLQ8NG68 377 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 OR8K5Q8NH50 307 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 SPPL2AQ8TCT8 520 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 C7orf34Q96L11 122 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 RDH12Q96NR8 316 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 FCRL4Q96PJ5 515 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 SNX18Q96RF0 628 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 DOHHQ9BU89 302 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 C6orf106Q9H6K1 298 aaPredicted RBP13.49□□□□□ -0.25
CLCN4-201ENST00000380829 C3orf18Q9UK00 162 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 PCDHGA10Q9Y5H3 936 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 A0A0G2JMP0 313 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 BTN3A3O00478 584 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 APBB3O95704 486 aa13.49□□□□□ -0.25
CLCN4-201ENST00000380829 SEMA4FO95754 770 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms