RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 SMNDC1O75940 238 aaKnown RBP eCLIP15.75■□□□□ 0.114e-7■■■■□ 21.6
HMGN1-203ENST00000380748 CLPSP04118 112 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 ALOX15P16050 662 aaPredicted RBP15.75■□□□□ 0.11
HMGN1-203ENST00000380748 CASP3P42574 277 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 ATP5J2P56134 94 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 CDKL1Q00532 357 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 ZNF267Q14586 743 aaPredicted RBP15.75■□□□□ 0.11
HMGN1-203ENST00000380748 TIGD3Q6B0B8 471 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 HIPK1Q86Z02 1210 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 TAGAPQ8N103 731 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 BBOF1Q8ND07 529 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 ZC3HAV1LQ96H79 300 aaKnown RBP15.75■□□□□ 0.11
HMGN1-203ENST00000380748 PDLIM5Q96HC4 596 aaKnown RBP15.75■□□□□ 0.11
HMGN1-203ENST00000380748 TMEM41AQ96HV5 264 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 FAM111AQ96PZ2 611 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 ROGDIQ9GZN7 287 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 ACBD3Q9H3P7 528 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 TSPY26PQ9H489 355 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 ZNF701Q9NV72 531 aaPredicted RBP15.75■□□□□ 0.11
HMGN1-203ENST00000380748 FETUBQ9UGM5 382 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 SH3BGRLO75368 114 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 PRKRAO75569 313 aaKnown RBP15.74■□□□□ 0.11
HMGN1-203ENST00000380748 KRT14P02533 472 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 CD22P20273 847 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 HIST1H1TP22492 207 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-203ENST00000380748 CD79BP40259 229 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 HNMTP50135 292 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 GAB1Q13480 694 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 CNTN4Q8IWV2 1026 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 TMEM171Q8WVE6 324 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 RHBDF1Q96CC6 855 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 UCN2Q96RP3 112 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 TBCDQ9BTW9 1192 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 PITHD1Q9GZP4 211 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-203ENST00000380748 VWA7Q9Y334 891 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 OARD1Q9Y530 152 aa15.74■□□□□ 0.11
HMGN1-203ENST00000380748 CAPN14A8MX76 684 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 SCELO95171 688 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 ZNF37AP17032 561 aaPredicted RBP15.73■□□□□ 0.11
HMGN1-203ENST00000380748 PGAM1P18669 254 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 UGT2B10P36537 528 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 VEZF1Q14119 521 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 SPRED3Q2MJR0 410 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 C18orf63Q68DL7 685 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 FAM45BPQ6NSW5 357 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 VWA1Q6PCB0 445 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 ZNF474Q6S9Z5 364 aaPredicted RBP15.73■□□□□ 0.11
HMGN1-203ENST00000380748 ANGPTL8Q6UXH0 198 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 C22orf34Q6ZV56 151 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 GRAMD2AQ8IUY3 354 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 TMEM139Q8IV31 216 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 PRR22Q8IZ63 422 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 ST13P4Q8IZP2 240 aaPredicted RBP15.73■□□□□ 0.11
HMGN1-203ENST00000380748 TXLNBQ8N3L3 684 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 RNF10Q8N5U6 811 aaKnown RBP15.73■□□□□ 0.11
HMGN1-203ENST00000380748 C7orf57Q8NEG2 295 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 OR1J4Q8NGS1 313 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 FAM45AQ8TCE6 357 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 STARD4Q96DR4 205 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 SORBS1Q9BX66 1292 aaKnown RBP15.73■□□□□ 0.11
HMGN1-203ENST00000380748 MS4A8Q9BY19 250 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 RPF2Q9H7B2 306 aaKnown RBP15.73■□□□□ 0.11
HMGN1-203ENST00000380748 YAE1D1Q9NRH1 226 aa15.73■□□□□ 0.11
HMGN1-203ENST00000380748 RYDENQ9NUL5 291 aaKnown RBP15.73■□□□□ 0.11
HMGN1-203ENST00000380748 C2orf92A0A1B0GVN3 265 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 NCF1BA6NI72 391 aaPredicted RBP15.72■□□□□ 0.11
HMGN1-203ENST00000380748 OR6C76A6NM76 312 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 NCF1CA8MVU1 366 aaPredicted RBP15.72■□□□□ 0.11
HMGN1-203ENST00000380748 SAP18O00422 153 aaKnown RBP15.72■□□□□ 0.11
HMGN1-203ENST00000380748 TGM6O95932 706 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 TP53P04637 393 aaPredicted RBP15.72■□□□□ 0.11
HMGN1-203ENST00000380748 NCF1P14598 390 aaPredicted RBP15.72■□□□□ 0.11
HMGN1-203ENST00000380748 SSTR4P31391 388 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 GCKP35557 465 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 SSR2P43308 183 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 PCYT1AP49585 367 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 STARP49675 285 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 EEF1A1P68104 462 aaKnown RBP15.72■□□□□ 0.11
HMGN1-203ENST00000380748 DOC2AQ14183 400 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 ZNF460Q14592 562 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 TSNQ15631 228 aaKnown RBP15.72■□□□□ 0.11
HMGN1-203ENST00000380748 KBTBD12Q3ZCT8 623 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 FBXO48Q5FWF7 155 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 EEF1A1P5Q5VTE0 462 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 TTC27Q6P3X3 843 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 TRIM42Q8IWZ5 723 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 SRFBP1Q8NEF9 429 aaKnown RBP15.72■□□□□ 0.11
HMGN1-203ENST00000380748 MAIP1Q8WWC4 291 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 UCN3Q969E3 161 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 BAG1Q99933 345 aaPredicted RBP15.72■□□□□ 0.11
HMGN1-203ENST00000380748 TMEM79Q9BSE2 394 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 RBSNQ9H1K0 784 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 OPN3Q9H1Y3 402 aaPredicted RBP15.72■□□□□ 0.11
HMGN1-203ENST00000380748 EHD1Q9H4M9 534 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 CXorf56Q9H5V9 222 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 SNX15Q9NRS6 342 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 GPRC5BQ9NZH0 403 aa15.72■□□□□ 0.11
HMGN1-203ENST00000380748 C2orf72A6NCS6 295 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 WASHC1A8K0Z3 465 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 PLOD2O00469 737 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms