RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 MLC1Q15049 377 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 SPRED3Q2MJR0 410 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 ZNF628Q5EBL2 1059 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 ANKRD46Q86W74 232 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 CLECL1Q8IZS7 167 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 ZSCAN1Q8NBB4 408 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 CCDC197Q8NCU1 140 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 OR14A16Q8NHC5 309 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 VPS33AQ96AX1 596 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 ZBED6CLQ96FA7 236 aaPredicted RBP17.53■□□□□ 0.4
SMN2-202ENST00000380742 OR52E6Q96RD3 313 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 TUBB6Q9BUF5 446 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 CCDC106Q9BWC9 280 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 ZNF160Q9HCG1 818 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 CPNE5Q9HCH3 593 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 FAM120CQ9NX05 1096 aaKnown RBP17.53■□□□□ 0.4
SMN2-202ENST00000380742 MAT2BQ9NZL9 334 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 ERVK-11Q9UQG0 969 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 LOC400499M0QZD8 3231 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 NSG1A0A0A6YYJ2 146 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 RNASET2O00584 256 aaKnown RBP17.53■□□□□ 0.4
SMN2-202ENST00000380742 C6orf47O95873 294 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 HPP00738 406 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 CAPN3P20807 821 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 GPR143P51810 404 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 PGDP52209 483 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 KCNK10P57789 538 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 SLC26A5P58743 744 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 MRPS35P82673 323 aaKnown RBP17.53■□□□□ 0.4
SMN2-202ENST00000380742 CBX1P83916 185 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 MAP4K2Q12851 820 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 HSPB3Q12988 150 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 ZNF267Q14586 743 aaPredicted RBP17.53■□□□□ 0.4
SMN2-202ENST00000380742 TERF2Q15554 542 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 TIGD2Q4W5G0 525 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 GALNT12Q8IXK2 581 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 ZNF321PQ8N8H1 164 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 MORN4Q8NDC4 146 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 ZFP28Q8NHY6 868 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 ZNF675Q8TD23 568 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 THAP4Q8WY91 577 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 KAT2AQ92830 837 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 DAZLQ92904 295 aaKnown RBP17.53■□□□□ 0.4
SMN2-202ENST00000380742 CTHRC1Q96CG8 243 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 SPDL1Q96EA4 605 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 VPS50Q96JG6 964 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 MRGBPQ9NV56 204 aa17.53■□□□□ 0.4
SMN2-202ENST00000380742 PPIEQ9UNP9 301 aaKnown RBP17.53■□□□□ 0.4
SMN2-202ENST00000380742 PRSS51A0A1B0GVH4 220 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 ASPDHA6ND91 283 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 K7ENP7 123 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 CELA2AP08217 269 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 S1PR1P21453 382 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 ADSLP30566 484 aaPredicted RBP17.52■□□□□ 0.39
SMN2-202ENST00000380742 CDK9P50750 372 aaKnown RBP17.52■□□□□ 0.39
SMN2-202ENST00000380742 VPS26BQ4G0F5 336 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 TRMT12Q53H54 448 aaKnown RBP17.52■□□□□ 0.39
SMN2-202ENST00000380742 ANXA8L1Q5VT79 327 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 INO80CQ6PI98 192 aaPredicted RBP17.52■□□□□ 0.39
SMN2-202ENST00000380742 SIMC1Q8NDZ2 872 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 SLC2A12Q8TD20 617 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 ZNF721Q8TF20 911 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 OR5P2Q8WZ92 322 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 SENP5Q96HI0 755 aaPredicted RBP17.52■□□□□ 0.39
SMN2-202ENST00000380742 FBXL20Q96IG2 436 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 CNPPD1Q9BV87 410 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 OR8D2Q9GZM6 311 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 ANKRA2Q9H9E1 313 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 ZNF639Q9UID6 485 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 ERVK-19Q9WJR5 959 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 CAPN7Q9Y6W3 813 aa17.52■□□□□ 0.39
SMN2-202ENST00000380742 ANKRD11Q6UB99 2663 aaPredicted RBP17.51■□□□□ 0.39
SMN2-202ENST00000380742 CCDC154A6NI56 674 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 ARGFXA6NJG6 315 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 SLC22A2O15244 555 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 CLPSP04118 112 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 IGKV3-11P04433 115 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 UCNP55089 124 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 TMPRSS3P57727 454 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 HBA1P69905 142 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 Q0VFX4 171 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 FUT7Q11130 342 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 TLR1Q15399 786 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 DCAF10Q5QP82 559 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 PLAG1Q6DJT9 500 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 TMEM107Q6UX40 140 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 TREML1Q86YW5 311 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 VWA5B2Q8N398 1253 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 APCDD1LQ8NCL9 501 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 VPS37AQ8NEZ2 397 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 B3GNT7Q8NFL0 401 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 OR7G2Q8NG99 324 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 OR1N1Q8NGS0 311 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 NCLNQ969V3 563 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 ELP4Q96EB1 424 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 CCDC115Q96NT0 180 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 NUDT9Q9BW91 350 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 TRIM4Q9C037 500 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 SERHLQ9NQF3 203 aa17.51■□□□□ 0.39
SMN2-202ENST00000380742 SIRT3Q9NTG7 399 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 462.4 ms