RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CCDC71Q8IV32 467 aaPredicted RBP8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF614Q8N883 585 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 COLGALT1Q8NBJ5 622 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 CPEB3Q8NE35 698 aaKnown RBP8.92□□□□□ -0.98
PTPRA-204ENST00000380393 PTPN18Q99952 460 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 SPRTNQ9H040 489 aaPredicted RBP8.92□□□□□ -0.98
PTPRA-204ENST00000380393 MINDY3Q9H8M7 445 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 TCF7L1Q9HCS4 588 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 SEMA3GQ9NS98 782 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 VAPAQ9P0L0 249 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 COMMD3Q9UBI1 195 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 FKBPLQ9UIM3 349 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 GOLT1BQ9Y3E0 138 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 NUBP2Q9Y5Y2 271 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 OTOFQ9HC10 1997 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 TCRBV5S1A1TA0A578 114 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 AOC2O75106 756 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 GATBO75879 557 aaKnown RBP8.92□□□□□ -0.98
PTPRA-204ENST00000380393 C1RP00736 705 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 NOS3P29474 1203 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 MMP12P39900 470 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 GPR3P46089 330 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 HTR5AP47898 357 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 DAPP51397 102 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 MTPNP58546 118 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF460Q14592 562 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 FNDC3BQ53EP0 1204 aaKnown RBP8.92□□□□□ -0.98
PTPRA-204ENST00000380393 LIPKQ5VXJ0 399 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 CDPF1Q6NVV7 123 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF613Q6PF04 617 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 CLEC9AQ6UXN8 241 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 FAM122BQ7Z309 247 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF321PQ8N8H1 164 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 Q8NFD4 153 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 PXT1Q8NFP0 134 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 HUS1BQ8NHY5 278 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 FAM162AQ96A26 154 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 KCTD15Q96SI1 283 aaPredicted RBP8.92□□□□□ -0.98
PTPRA-204ENST00000380393 OCSTAMPQ9BR26 566 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 TWSG1Q9GZX9 223 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 DNAJB11Q9UBS4 358 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 BTRCQ9Y297 605 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 PLEKHM1Q9Y4G2 1056 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 DOCK1Q14185 1865 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 STBD1O95210 358 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 HPP00738 406 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 VIPP01282 170 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 IFNA10P01566 189 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 IFNGP01579 166 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 GABRB1P18505 474 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 CYP2F1P24903 491 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 CSF2RBP32927 897 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 CDKN2CP42773 168 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 ANXA11P50995 505 aaKnown RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 TNFRSF9Q07011 255 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 DHCR24Q15392 516 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 SSX1Q16384 188 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 TSTD2Q5T7W7 516 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 B3GNT9Q6UX72 402 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 PGBD5Q8N414 524 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 NIPA2Q8N8Q9 360 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 BOLLQ8N9W6 283 aaKnown RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 PCSK9Q8NBP7 692 aaKnown RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 TTC16Q8NEE8 873 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 REPS2Q8NFH8 660 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF707Q96C28 371 aaPredicted RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 FCRL1Q96LA6 429 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 CCNL2Q96S94 520 aaPredicted RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 FICDQ9BVA6 458 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 PINK1Q9BXM7 581 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 PRO1933Q9H354 126 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 RERGLQ9H628 205 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 SLC6A20Q9NP91 592 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 PLCXD1Q9NUJ7 323 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 SLC22A14Q9Y267 594 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 CCL15-CCL14A0A0B4J2E2 113 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 A0A0G2JLL6 359 aaPredicted RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 A0A0U1RQF3 1178 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 TSTD3H0UI37 97 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF14P17017 642 aaPredicted RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 SLC6A1P30531 599 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 VIPR1P32241 457 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 MAP3K8P41279 467 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 PEA15Q15121 130 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 CCL15Q16663 113 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 ZSWIM7Q19AV6 140 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 SYTL3Q4VX76 610 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 NPSR1Q6W5P4 371 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 PRRT2Q7Z6L0 340 aaPredicted RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 RELL2Q8NC24 303 aaPredicted RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 OR10K1Q8NGX5 313 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 MAFIPQ8WZ33 124 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 WNT2BQ93097 391 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 MSLNLQ96KJ4 702 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 MRPL57Q9BQC6 102 aaKnown RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 NFKBIL1Q9UBC1 381 aaPredicted RBP8.91□□□□□ -0.98
PTPRA-204ENST00000380393 IKZF3Q9UKT9 509 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 PCDHA10Q9Y5I2 948 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 COL1A2P08123 1366 aa8.91□□□□□ -0.98
PTPRA-204ENST00000380393 OTCP00480 354 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms