RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MED13Q9UHV7 2174 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 TRBV11-1A0A0K0K1C0 115 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 A8MUI8 341 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 ANKRD28O15084 1053 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 SCAMP2O15127 329 aaKnown RBP17.43■□□□□ 0.38
SSU72-203ENST00000378725 ZFAND5O76080 213 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 CLPSP04118 112 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 ALDOCP09972 364 aaKnown RBP17.43■□□□□ 0.38
SSU72-203ENST00000378725 FRKP42685 505 aaPredicted RBP17.43■□□□□ 0.38
SSU72-203ENST00000378725 IDH3AP50213 366 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 ZNF385BQ569K4 471 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 HSDL2Q6YN16 418 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 ASB18Q6ZVZ8 466 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 RPS19BP1Q86WX3 136 aaKnown RBP17.43■□□□□ 0.38
SSU72-203ENST00000378725 FAM9CQ8IZT9 166 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 SLC5A8Q8N695 610 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 ZNF675Q8TD23 568 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 DOK4Q8TEW6 326 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 STON2Q8WXE9 905 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 PPCDCQ96CD2 204 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 COQ8BQ96D53 544 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 BBC3Q96PG8 261 aaPredicted RBP17.43■□□□□ 0.38
SSU72-203ENST00000378725 OR52B2Q96RD2 323 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 BBS4Q96RK4 519 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 ZNF71Q9NQZ8 489 aaPredicted RBP17.43■□□□□ 0.38
SSU72-203ENST00000378725 STMN3Q9NZ72 180 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 MAT2BQ9NZL9 334 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 COPS7AQ9UBW8 275 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 TEKT2Q9UIF3 430 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 MAPRE3Q9UPY8 281 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 ERVK-19Q9WJR5 959 aa17.43■□□□□ 0.38
SSU72-203ENST00000378725 TMEM200CA6NKL6 621 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 CDK2AP1O14519 115 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 PRKNO60260 465 aaPredicted RBP17.42■□□□□ 0.38
SSU72-203ENST00000378725 DIAPH2O60879 1101 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 DDX5P17844 614 aaKnown RBP17.42■□□□□ 0.38
SSU72-203ENST00000378725 HPCAL1P37235 193 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 AQP5P55064 265 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 SLC37A1P57057 533 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 MLF1P58340 268 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 MEP1AQ16819 746 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 LSM12Q3MHD2 195 aaKnown RBP17.42■□□□□ 0.38
SSU72-203ENST00000378725 ZNF628Q5EBL2 1059 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 ACER2Q5QJU3 275 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 ANKRD26P1Q6NSI1 321 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 FAM111BQ6SJ93 734 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 CAMKMTQ7Z624 323 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 KRTCAP2Q8N6L1 136 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 ZNF615Q8N8J6 731 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 OR7G1Q8NGA0 311 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 OR7A2PQ8NGA2 310 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 ERP27Q96DN0 273 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 AMDHD1Q96NU7 426 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 CCDC28BQ9BUN5 200 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 CNPPD1Q9BV87 410 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 GLIPR2Q9H4G4 154 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 CDCP1Q9H5V8 836 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 SLAMF7Q9NQ25 335 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.42■□□□□ 0.38
SSU72-203ENST00000378725 AIG1Q9NVV5 245 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 SH3BP4Q9P0V3 963 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 GPR45Q9Y5Y3 372 aa17.42■□□□□ 0.38
SSU72-203ENST00000378725 OR6C76A6NM76 312 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 MAN1A2O60476 641 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 NTSP30990 170 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 SSTR4P31391 388 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 NCBP2P52298 156 aaKnown RBP eCLIP17.41■□□□□ 0.38
SSU72-203ENST00000378725 RNF4P78317 190 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 LTB4RQ15722 352 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 TRMT12Q53H54 448 aaKnown RBP17.41■□□□□ 0.38
SSU72-203ENST00000378725 SOWAHCQ53LP3 525 aaPredicted RBP17.41■□□□□ 0.38
SSU72-203ENST00000378725 CPTPQ5TA50 214 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 ABHD17BQ5VST6 288 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 FCRLBQ6BAA4 426 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 NXNQ6DKJ4 435 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 LINC00696Q6ZRV3 163 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 ACAD11Q709F0 780 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 VWA5B2Q8N398 1253 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 NATD1Q8N6N6 113 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 ADCY4Q8NFM4 1077 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 OR5L2Q8NGL0 311 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 OR9A2Q8NGT5 310 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 NUBPLQ8TB37 319 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 NUDT8Q8WV74 236 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 SLC39A7Q92504 469 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 TM9SF4Q92544 642 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 HAS2Q92819 552 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 PRPF18Q99633 342 aaKnown RBP17.41■□□□□ 0.38
SSU72-203ENST00000378725 EBF4Q9BQW3 602 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 SIKE1Q9BRV8 207 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 BRINP2Q9C0B6 783 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 RNF32Q9H0A6 362 aa17.41■□□□□ 0.38
SSU72-203ENST00000378725 ACSS1Q9NUB1 689 aaPredicted RBP17.41■□□□□ 0.38
SSU72-203ENST00000378725 PLOD2O00469 737 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 PDPK1O15530 556 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 DPM1O60762 260 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 SLITRK5O94991 958 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 IFI6P09912 130 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 LAMP1P11279 417 aa17.4■□□□□ 0.38
SSU72-203ENST00000378725 PTGER1P34995 402 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms