RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 LPAL2Q16609 132 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 SLC5A12Q1EHB4 618 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 EXOC3L2Q2M3D2 409 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 KIAA0895LQ68EN5 471 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 METTL4Q8N3J2 472 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 LINC00471Q8N535 108 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 SH3YL1Q96HL8 342 aaPredicted RBP13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 LGR4Q9BXB1 951 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 CRNNQ9UBG3 495 aaPredicted RBP13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 FAM186AA6NE01 2351 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 SLC9B1P1A6NJY1 282 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 ZNF99A8MXY4 864 aaPredicted RBP13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 FOXE1O00358 373 aaPredicted RBP13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 HMGN2P05204 90 aaKnown RBP13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 B4GALNT1Q00973 533 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 MARVELD2Q8N4S9 558 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 OR10H4Q8NGA5 316 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 IPCEF1Q8WWN9 437 aaPredicted RBP13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 ZDHHC5Q9C0B5 715 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 EXO5Q9H790 373 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 KAT8Q9H7Z6 458 aaKnown RBP13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 TCRBV3S1A0A5B6 114 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 CASKO14936 926 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 KHNYNO15037 678 aaKnown RBP13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 DCTP40126 519 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 MC3RP41968 323 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 CSNK1EP49674 416 aaKnown RBP13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 RPP38P78345 283 aaKnown RBP13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 VEZF1Q14119 521 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 XKR7Q5GH72 579 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 SLC36A4Q6YBV0 504 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 HSDL2Q6YN16 418 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 HS3ST5Q8IZT8 346 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 TCEANCQ8N8B7 351 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 GATSQ8NAP1 163 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 OR13H1Q8NG92 308 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 OR2L8Q8NGY9 312 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 OR52P1PQ8NH57 321 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 SUN3Q8TAQ9 357 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 JSRP1Q96MG2 331 aaPredicted RBP13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 PHF7Q9BWX1 381 aaPredicted RBP13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 UBE2ZQ9H832 354 aaPredicted RBP13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 DCAF13Q9NV06 445 aaKnown RBP13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 MED31Q9Y3C7 131 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 A0A0A6YYC8 382 aaPredicted RBP13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 I3L1I5 382 aaPredicted RBP13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 IFI30P13284 250 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 SMSP52788 366 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 UGT3A2Q3SY77 523 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 NIPAL1Q6NVV3 410 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 SLC30A6Q6NXT4 461 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 RBM12BQ8IXT5 1001 aaKnown RBP13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 OR6K6Q8NGW6 343 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 SNX33Q8WV41 574 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 GAB3Q8WWW8 586 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 GAL3ST3Q96A11 431 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 SLC25A36Q96CQ1 311 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 MAGIXQ9H6Y5 334 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 TRPV5Q9NQA5 729 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 MGAT4BQ9UQ53 548 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 MAU2Q9Y6X3 613 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 AHCTF1Q8WYP5 2266 aa13.46□□□□□ -0.25
SHROOM1-203ENST00000378679 PSME4Q14997 1843 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 A0A0J9YY10 115 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 H0YAE9 185 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF12P17014 697 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 NUDT1P36639 197 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 BCAP31P51572 246 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 RAB39AQ14964 217 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 C1orf189Q5VU69 101 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 CPZQ66K79 652 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF57Q68EA5 555 aaPredicted RBP13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 SERPINA11Q86U17 422 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 NECTIN3Q9NQS3 549 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC23A2Q9UGH3 650 aa13.46□□□□□ -0.26
SHROOM1-203ENST00000378679 CENPXA8MT69 81 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 RDH16O75452 317 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 CD36P16671 472 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 IHHQ14623 411 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 UGT8Q16880 541 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 C6orf141Q5SZD1 244 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 DENND6BQ8NEG7 585 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 OR9A2Q8NGT5 310 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 RAB2BQ8WUD1 216 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF583Q96ND8 569 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 CD180Q99467 661 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 TAPBPLQ9BX59 468 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 PITHD1Q9GZP4 211 aaPredicted RBP13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 IFT52Q9Y366 437 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 TMCC2O75069 709 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 RHCEP18577 417 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 TIGD6Q17RP2 521 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 RPS26P11Q5JNZ5 115 aaPredicted RBP13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 CEP78Q5JTW2 689 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 PIWIL3Q7Z3Z3 882 aaKnown RBP13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 OR5D16Q8NGK9 328 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 MRGPRX1Q96LB2 322 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 C1QTNF3Q9BXJ4 246 aa13.45□□□□□ -0.26
SHROOM1-203ENST00000378679 NAA50Q9GZZ1 169 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms