RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 ACSS1Q9NUB1 689 aaPredicted RBP13.23□□□□□ -0.29
TPM2-204ENST00000378300 SLC39A1Q9NY26 324 aa13.23□□□□□ -0.29
TPM2-204ENST00000378300 ABCD2Q9UBJ2 740 aa13.23□□□□□ -0.29
TPM2-204ENST00000378300 PSME2Q9UL46 239 aa13.23□□□□□ -0.29
TPM2-204ENST00000378300 CDC14AQ9UNH5 594 aa13.23□□□□□ -0.29
TPM2-204ENST00000378300 USP22Q9UPT9 525 aa13.23□□□□□ -0.29
TPM2-204ENST00000378300 ENTPD4Q9Y227 616 aa13.23□□□□□ -0.29
TPM2-204ENST00000378300 CLDN16Q9Y5I7 305 aa13.23□□□□□ -0.29
TPM2-204ENST00000378300 B3GALT1Q9Y5Z6 326 aa13.23□□□□□ -0.29
TPM2-204ENST00000378300 B4E171 279 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 FHP07954 510 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 CSNK2A2P19784 350 aaPredicted RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 MAOAP21397 527 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 NTSP30990 170 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 TSPAN7P41732 249 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 ERFP50548 548 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 MAPK10P53779 464 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 CASP9P55211 416 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 MAP7Q14244 749 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 GRAMD1BQ3KR37 738 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.22□□□□□ -0.29
TPM2-204ENST00000378300 ZNF385CQ66K41 422 aaPredicted RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 ADCY4Q8NFM4 1077 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 OR9A2Q8NGT5 310 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 PNPT1Q8TCS8 783 aaKnown RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 OR5P2Q8WZ92 322 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 TANKQ92844 425 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 PHF12Q96QT6 1004 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 CPPED1Q9BRF8 314 aaPredicted RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 THUMPD3Q9BV44 507 aaKnown RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 ANKRA2Q9H9E1 313 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 CLK4Q9HAZ1 481 aaKnown RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 LANCL2Q9NS86 450 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 PTTG2Q9NZH5 202 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 CTSFQ9UBX1 484 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 PCDHGB4Q9UN71 923 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 SNX8Q9Y5X2 465 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 ZNF780BQ9Y6R6 833 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 PTPRZ1P23471 2315 aaPredicted RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 TEX51A0A1B0GUA7 166 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 CLIC1O00299 241 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 GPR75O95800 540 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 CAPNS1P04632 268 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 SMIM18P0DKX4 95 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 CPMP14384 443 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 CSRP1P21291 193 aaKnown RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 RORAP35398 523 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 SOX18P35713 384 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 SOX11P35716 441 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 ABHD18Q0P651 414 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 SLC13A2Q13183 592 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 BPHLQ86WA6 291 aaPredicted RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 ZC3H7AQ8IWR0 971 aaKnown RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 PRSS58Q8IYP2 241 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 NATD1Q8N6N6 113 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 DNAJB8Q8NHS0 232 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 ZFP90Q8TF47 636 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 PPWD1Q96BP3 646 aaKnown RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 LIN37Q96GY3 246 aaPredicted RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 DEPDC7Q96QD5 511 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 SLC35A5Q9BS91 424 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 PRDM9Q9NQV7 894 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 GIMAP4Q9NUV9 329 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 GPATCH2Q9NW75 528 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 AKAP7Q9P0M2 348 aaPredicted RBP13.22□□□□□ -0.29
TPM2-204ENST00000378300 PISDQ9UG56 409 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 CD300AQ9UGN4 299 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 VPS4AQ9UN37 437 aa13.22□□□□□ -0.29
TPM2-204ENST00000378300 FAM149AA5PLN7 773 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 BMP10O95393 424 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 PPP2R1BP30154 601 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 MPIP34949 423 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 SOAT1P35610 550 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 LRRC74AQ0VAA2 488 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 MLC1Q15049 377 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 NKAIN1Q4KMZ8 207 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 DGAT2L6Q6ZPD8 337 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 SHISA6Q6ZSJ9 500 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 LAPTM4BQ86VI4 370 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 IFNEQ86WN2 208 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 ZNF595Q8IYB9 648 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 LRRC25Q8N386 305 aaPredicted RBP13.21□□□□□ -0.29
TPM2-204ENST00000378300 SIMC1Q8NDZ2 872 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 OR8J3Q8NGG0 315 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 NETO1Q8TDF5 533 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 KAT2AQ92830 837 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 MRPS26Q9BYN8 205 aaKnown RBP13.21□□□□□ -0.29
TPM2-204ENST00000378300 ULBP3Q9BZM4 244 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 ZNF696Q9H7X3 374 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 TPT1P8Q9HAU6 139 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 NECTIN3Q9NQS3 549 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 PRTFDC1Q9NRG1 225 aa13.21□□□□□ -0.29
TPM2-204ENST00000378300 CEP250Q9BV73 2442 aa13.21□□□□□ -0.3
TPM2-204ENST00000378300 CNOT1A5YKK6 2376 aaKnown RBP13.2□□□□□ -0.3
TPM2-204ENST00000378300 TMX2-CTNND1H3BSU7 103 aa13.2□□□□□ -0.3
TPM2-204ENST00000378300 MEN1O00255 615 aa13.2□□□□□ -0.3
TPM2-204ENST00000378300 PLD2O14939 933 aa13.2□□□□□ -0.3
TPM2-204ENST00000378300 GFRA3O60609 400 aa13.2□□□□□ -0.3
TPM2-204ENST00000378300 CTNSO60931 367 aa13.2□□□□□ -0.3
TPM2-204ENST00000378300 CPNE3O75131 537 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms