RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 KLHL29Q96CT2 875 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 SPACA9Q96E40 222 aaPredicted RBP15.55■□□□□ 0.08
HMGN4-201ENST00000377575 KCNA7Q96RP8 456 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 FAM173AQ9BQD7 235 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 DEPPQ9NTK1 212 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 ZNF835Q9Y2P0 537 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 TIMM22Q9Y584 194 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 GNG14A0A1W2PPG7 69 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 A0A1W2PS29 197 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 TLDC2A0PJX2 215 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 SERTM1A2A2V5 107 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 HS6ST1O60243 411 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 CDC40O60508 579 aaKnown RBP eCLIP15.54■□□□□ 0.08
HMGN4-201ENST00000377575 ZNF354AO60765 605 aaPredicted RBP15.54■□□□□ 0.08
HMGN4-201ENST00000377575 ERAL1O75616 437 aaKnown RBP15.54■□□□□ 0.08
HMGN4-201ENST00000377575 NADKO95544 446 aaPredicted RBP15.54■□□□□ 0.08
HMGN4-201ENST00000377575 CLPSP04118 112 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 ATP1B1P05026 303 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 ESRRAP11474 423 aaPredicted RBP15.54■□□□□ 0.08
HMGN4-201ENST00000377575 CPA3P15088 417 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 CSNK2A2P19784 350 aaPredicted RBP15.54■□□□□ 0.08
HMGN4-201ENST00000377575 CNR1P21554 472 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 SSTR4P31391 388 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 PTGER1P34995 402 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 GSTM5P46439 218 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 ALDH9A1P49189 494 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 NAGLUP54802 743 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 HSF1Q00613 529 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 FUT7Q11130 342 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 C3AR1Q16581 482 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 LIPMQ5VYY2 423 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 FAM219BQ5XKK7 198 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 HLA-DQA1Q5Y7H0 255 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 WDR93Q6P2C0 686 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 RPTNQ6XPR3 784 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 FAM47EQ6ZV65 393 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 SLC22A16Q86VW1 577 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 EID3Q8N140 333 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 OR7G1Q8NGA0 311 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 OR2W6PQ8NHA6 318 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 CCDC120Q96HB5 630 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 APOPT1Q96IL0 206 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 OXSMQ9NWU1 459 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 MKS1Q9NXB0 559 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 TINAGQ9UJW2 476 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 CES1P1Q9UKY3 287 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 ZNF780BQ9Y6R6 833 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 MAST4O15021 2626 aa15.54■□□□□ 0.08
HMGN4-201ENST00000377575 C2orf92A0A1B0GVN3 265 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 CAPN14A8MX76 684 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 UBFD1O14562 309 aaKnown RBP15.53■□□□□ 0.08
HMGN4-201ENST00000377575 PRRG2O14669 202 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 FBXO45P0C2W1 286 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 CT62P0C5K7 136 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 CCL3P10147 92 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 CHN1P15882 459 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 SERPINB3P29508 390 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 TIA1P31483 386 aaKnown RBP eCLIP15.53■□□□□ 0.087e-13■■■■□ 23.5
HMGN4-201ENST00000377575 PPIAP62937 165 aaKnown RBP15.53■□□□□ 0.08
HMGN4-201ENST00000377575 HMGCS1Q01581 520 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 IMPG1Q17R60 797 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 ZNF791Q3KP31 576 aaPredicted RBP15.53■□□□□ 0.08
HMGN4-201ENST00000377575 PAOXQ6QHF9 649 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 MMP21Q8N119 569 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 VWA5B2Q8N398 1253 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 AENQ8WTP8 325 aaKnown RBP15.53■□□□□ 0.08
HMGN4-201ENST00000377575 CAVIN3Q969G5 261 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 TP53INP1Q96A56 240 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 TTTY12Q9BZ98 90 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 BRINP2Q9C0B6 783 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 OR10A5Q9H207 317 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 UTS2RQ9UKP6 389 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 CFL2Q9Y281 166 aa15.53■□□□□ 0.08
HMGN4-201ENST00000377575 NCOA6Q14686 2063 aaPredicted RBP15.53■□□□□ 0.08
HMGN4-201ENST00000377575 NAV2Q8IVL1 2488 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 A0A0G2JMM0 328 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 A0A1W2PPB8 328 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 A0A1W2PRS3 328 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 PINLYPA6NC86 204 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 CYSRT1A8MQ03 144 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 KIR3DP1A8MWS1 328 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 G3V3Y1 287 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 IL3P08700 152 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 DRD2P14416 443 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 FEN1P39748 380 aaKnown RBP15.52■□□□□ 0.08
HMGN4-201ENST00000377575 TMED10P49755 219 aaKnown RBP15.52■□□□□ 0.08
HMGN4-201ENST00000377575 FOXA1P55317 472 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 NRG3P56975 720 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 RAE1P78406 368 aaKnown RBP15.52■□□□□ 0.08
HMGN4-201ENST00000377575 HEPACAMQ14CZ8 416 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 CMPK2Q5EBM0 449 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 SPDYAQ5MJ70 313 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 SLC22A10Q63ZE4 541 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 ARHGAP11AQ6P4F7 1023 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 LYPD8Q6UX82 237 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 TRABD2AQ86V40 505 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 SAMD14Q8IZD0 417 aaPredicted RBP15.52■□□□□ 0.08
HMGN4-201ENST00000377575 LRRC25Q8N386 305 aaPredicted RBP15.52■□□□□ 0.08
HMGN4-201ENST00000377575 FBXW8Q8N3Y1 598 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 ZNF441Q8N8Z8 693 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms