RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 CMTM5Q96DZ9 223 aa19.9■□□□□ 0.78
CBWD3-202ENST00000377342 NPAS2Q99743 824 aa19.9■□□□□ 0.78
CBWD3-202ENST00000377342 PELOQ9BRX2 385 aaKnown RBP19.9■□□□□ 0.78
CBWD3-202ENST00000377342 PNO1Q9NRX1 252 aaKnown RBP19.9■□□□□ 0.78
CBWD3-202ENST00000377342 MAP10Q9P2G4 905 aa19.9■□□□□ 0.78
CBWD3-202ENST00000377342 TAGLN3Q9UI15 199 aa19.9■□□□□ 0.78
CBWD3-202ENST00000377342 A0A1W2PQ72 361 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 HRKO00198 91 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 IFNA16P05015 189 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 ABCB1P08183 1280 aaPredicted RBP19.89■□□□□ 0.77
CBWD3-202ENST00000377342 T-ENOLP0DO92 83 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 WT1P19544 449 aaPredicted RBP19.89■□□□□ 0.77
CBWD3-202ENST00000377342 NT5EP21589 574 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 CPA2P48052 419 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 OR4D2P58180 307 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 EEF1A2Q05639 463 aaKnown RBP19.89■□□□□ 0.77
CBWD3-202ENST00000377342 BIKQ13323 160 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 SPRED3Q2MJR0 410 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 GTDC1Q4AE62 458 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 FAM111BQ6SJ93 734 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 DPP10Q8N608 796 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 VPS37AQ8NEZ2 397 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 OR4A15Q8NGL6 344 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 GOT1L1Q8NHS2 421 aaPredicted RBP19.89■□□□□ 0.77
CBWD3-202ENST00000377342 ADAMTS17Q8TE56 1095 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 KAT2AQ92830 837 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 KIAA1143Q96AT1 154 aaPredicted RBP19.89■□□□□ 0.77
CBWD3-202ENST00000377342 CTHRC1Q96CG8 243 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 NAF1Q96HR8 494 aaKnown RBP19.89■□□□□ 0.77
CBWD3-202ENST00000377342 ITCHQ96J02 903 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 PAIP1Q9H074 479 aaKnown RBP19.89■□□□□ 0.77
CBWD3-202ENST00000377342 RMND5AQ9H871 391 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 ANKRA2Q9H9E1 313 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 NEUROD4Q9HD90 331 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 TAS2R9Q9NYW1 312 aa19.89■□□□□ 0.77
CBWD3-202ENST00000377342 SYNDIG1LA6NDD5 238 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 A8MUA0 341 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 MRASO14807 208 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 CPSF4O95639 269 aaKnown RBP19.88■□□□□ 0.77
CBWD3-202ENST00000377342 GALNSP34059 522 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 MC3RP41968 323 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 C6orf10Q5SRN2 563 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 FHL5Q5TD97 284 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 KIRREL2Q6UWL6 708 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 TMEM107Q6UX40 140 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 GALNT12Q8IXK2 581 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 MSRB3Q8IXL7 192 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 SIMC1Q8NDZ2 872 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 OR7G2Q8NG99 324 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 RBM18Q96H35 190 aaKnown RBP19.88■□□□□ 0.77
CBWD3-202ENST00000377342 PANX1Q96RD7 426 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 DMXL2Q8TDJ6 3036 aa19.88■□□□□ 0.77
CBWD3-202ENST00000377342 TRBV5-3A0A0A0MS03 114 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 C17orf105B2RV13 164 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 FXYD1O00168 92 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 RFXANKO14593 260 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 CREG1O75629 220 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 IGHEP01854 428 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 C1QCP02747 245 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 GSNP06396 782 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 COX6A1P12074 109 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 OTX2P32243 289 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 LRRC74AQ0VAA2 488 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 SSPNQ14714 243 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 PCOLCEQ15113 449 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 LRIF1Q5T3J3 769 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 DLEU7Q6UYE1 221 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 CPEB2Q7Z5Q1 589 aaKnown RBP19.87■□□□□ 0.77
CBWD3-202ENST00000377342 ZNF248Q8NDW4 579 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 FBXO27Q8NI29 283 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 KCNE4Q8WWG9 221 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 RIT1Q92963 219 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 SLC25A37Q9NYZ2 338 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 C19orf25Q9UFG5 118 aaPredicted RBP19.87■□□□□ 0.77
CBWD3-202ENST00000377342 ZNF639Q9UID6 485 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 A0A096LPI6 279 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 SAGE2PA6NJ88 616 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 CLPSP04118 112 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 S1PR1P21453 382 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 STX5Q13190 355 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 DUSP8Q13202 625 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 TRMT12Q53H54 448 aaKnown RBP19.87■□□□□ 0.77
CBWD3-202ENST00000377342 MRGPREQ86SM8 312 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 DHDDSQ86SQ9 333 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 CLEC4FQ8N1N0 589 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 VWA5B2Q8N398 1253 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 C7orf57Q8NEG2 295 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 OR11G2Q8NGC1 345 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 ELP4Q96EB1 424 aa19.87■□□□□ 0.77
CBWD3-202ENST00000377342 CCDC86Q9H6F5 360 aaKnown RBP19.87■□□□□ 0.77
CBWD3-202ENST00000377342 IGHV1-45A0A0A0MS14 117 aa19.86■□□□□ 0.77
CBWD3-202ENST00000377342 PLOD2O00469 737 aa19.86■□□□□ 0.77
CBWD3-202ENST00000377342 PCDH17O14917 1159 aa19.86■□□□□ 0.77
CBWD3-202ENST00000377342 SEC24DO94855 1032 aaPredicted RBP19.86■□□□□ 0.77
CBWD3-202ENST00000377342 DDAH2O95865 285 aa19.86■□□□□ 0.77
CBWD3-202ENST00000377342 GPC1P35052 558 aa19.86■□□□□ 0.77
CBWD3-202ENST00000377342 TRPC1P48995 793 aa19.86■□□□□ 0.77
CBWD3-202ENST00000377342 MAP4K2Q12851 820 aa19.86■□□□□ 0.77
CBWD3-202ENST00000377342 MMEL1Q495T6 779 aa19.86■□□□□ 0.77
CBWD3-202ENST00000377342 PAPD4Q6PIY7 484 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms