RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 SEC16AO15027 2179 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 LILRA5A6NI73 299 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 LAMTOR5O43504 91 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 B4GAT1O43505 415 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 SOX18P35713 384 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 MLLT3P42568 568 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-206ENST00000376496 RBBP4Q09028 425 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 FUT5Q11128 374 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 MLC1Q15049 377 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 RBM45Q8IUH3 476 aaKnown RBP11.84□□□□□ -0.51
CLCN6-206ENST00000376496 PACRGLQ8N7B6 248 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 NUP43Q8NFH3 380 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 ZNF764Q96H86 408 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-206ENST00000376496 ELF4Q99607 663 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-206ENST00000376496 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-206ENST00000376496 RAD21L1Q9H4I0 556 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 CAPN10Q9HC96 672 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 PHF11Q9UIL8 331 aa11.84□□□□□ -0.51
CLCN6-206ENST00000376496 SAMHD1Q9Y3Z3 626 aaKnown RBP11.84□□□□□ -0.51
CLCN6-206ENST00000376496 CYR61O00622 381 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 CHST10O43529 356 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 RECKO95980 971 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 CFIP05156 583 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 NR2F1P10589 423 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 RRM2P31350 389 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 PIGAP37287 484 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 ALDH3A2P51648 485 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 ARFIP1P53367 373 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 GANABQ14697 944 aaKnown RBP11.83□□□□□ -0.51
CLCN6-206ENST00000376496 DGAT2L6Q6ZPD8 337 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 LRRC25Q8N386 305 aaPredicted RBP11.83□□□□□ -0.51
CLCN6-206ENST00000376496 NATD1Q8N6N6 113 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 ZNF655Q8N720 491 aaPredicted RBP11.83□□□□□ -0.51
CLCN6-206ENST00000376496 VANGL1Q8TAA9 524 aaPredicted RBP11.83□□□□□ -0.51
CLCN6-206ENST00000376496 SDCCAG3Q96C92 435 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 PEX11GQ96HA9 241 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 COL21A1Q96P44 957 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 TREX2Q9BQ50 279 aaPredicted RBP11.83□□□□□ -0.51
CLCN6-206ENST00000376496 TOR3AQ9H497 397 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 SEMA3GQ9NS98 782 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 EXD2Q9NVH0 621 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 NDUFAF4Q9P032 175 aa11.83□□□□□ -0.51
CLCN6-206ENST00000376496 H0YJX3 145 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 JRKO75564 520 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 SMNDC1O75940 238 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLCN6-206ENST00000376496 TDGF1P13385 188 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 CYP4B1P13584 511 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 ATP6V1B1P15313 513 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 DDX5P17844 614 aaKnown RBP11.83□□□□□ -0.52
CLCN6-206ENST00000376496 CSF2RBP32927 897 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 RNF144AP50876 292 aaPredicted RBP11.83□□□□□ -0.52
CLCN6-206ENST00000376496 SIGLEC14Q08ET2 396 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 MYBPC3Q14896 1274 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 SLC36A3Q495N2 470 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 PMS2CLQ68D20 193 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 OR52E8Q6IFG1 317 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 KRT80Q6KB66 452 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 CYP4Z1Q86W10 505 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 DHRSXQ8N5I4 330 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 GPR32P1Q8NGA4 272 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 OR5K1Q8NHB7 308 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 OSBPL10Q9BXB5 764 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 ANKHQ9HCJ1 492 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 A4GALTQ9NPC4 353 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 DDX18Q9NVP1 670 aaKnown RBP11.83□□□□□ -0.52
CLCN6-206ENST00000376496 PSME2Q9UL46 239 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 TMEM184BQ9Y519 407 aaPredicted RBP11.83□□□□□ -0.52
CLCN6-206ENST00000376496 MAU2Q9Y6X3 613 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 IGHV1OR21-1A0A087WYE8 117 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 FOXS1O43638 330 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 CHRM4P08173 479 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 THRBP10828 461 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 TLX1P31314 330 aaPredicted RBP11.83□□□□□ -0.52
CLCN6-206ENST00000376496 PPP2R2BQ00005 443 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 PUM1Q14671 1186 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLCN6-206ENST00000376496 EXOSC7Q15024 291 aaKnown RBP11.83□□□□□ -0.52
CLCN6-206ENST00000376496 IFI44LQ53G44 452 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 PRR23CQ6ZRP0 262 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 ARHGEF39Q8N4T4 335 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 ZG16BQ96DA0 208 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 MBOAT4Q96T53 435 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 AMBRA1Q9C0C7 1298 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 ROGDIQ9GZN7 287 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 SMOC1Q9H4F8 434 aa11.83□□□□□ -0.52
CLCN6-206ENST00000376496 PDP1Q9P0J1 537 aaPredicted RBP11.83□□□□□ -0.52
CLCN6-206ENST00000376496 ATXN7L1Q9ULK2 861 aaPredicted RBP11.83□□□□□ -0.52
CLCN6-206ENST00000376496 TTC28Q96AY4 2481 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 FHP07954 510 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 CPMP14384 443 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 PPP2R1BP30154 601 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 GABRA4P48169 554 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 CLCN2P51788 898 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 CDH15P55291 814 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 TXNL4AP83876 142 aaKnown RBP11.82□□□□□ -0.52
CLCN6-206ENST00000376496 PLK5Q496M5 336 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 GPAT3Q53EU6 434 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 CRB2Q5IJ48 1285 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 TTC29Q8NA56 475 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-206ENST00000376496 SLC16A11Q8NCK7 471 aa11.82□□□□□ -0.52
CLCN6-206ENST00000376496 SLC9A6Q92581 669 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms