RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 GID4Q8IVV7 300 aa16.02■□□□□ 0.16
VARS-215ENST00000375663 SUN3Q8TAQ9 357 aa16.02■□□□□ 0.16
VARS-215ENST00000375663 ZNF354BQ96LW1 612 aa16.02■□□□□ 0.16
VARS-215ENST00000375663 KLHL42Q9P2K6 505 aa16.02■□□□□ 0.16
VARS-215ENST00000375663 TBC1D24Q9ULP9 559 aa16.02■□□□□ 0.16
VARS-215ENST00000375663 SHROOM3Q8TF72 1996 aa16.02■□□□□ 0.16
VARS-215ENST00000375663 LAMB2P55268 1798 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 IGLV3-10A0A075B6K4 115 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 A0A1W2PRQ8 180 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 M0R3H8 397 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 CLDN4O14493 209 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 GMFGO60234 142 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 ILF3Q12906 894 aaKnown RBP eCLIP16.02■□□□□ 0.15
VARS-215ENST00000375663 ZNF267Q14586 743 aaPredicted RBP16.02■□□□□ 0.15
VARS-215ENST00000375663 OXA1LQ15070 435 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 CTU2Q2VPK5 515 aaKnown RBP16.02■□□□□ 0.15
VARS-215ENST00000375663 ANKRD34AQ69YU3 496 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 CEACAM19Q7Z692 300 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 NOXA1Q86UR1 476 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 SETD7Q8WTS6 366 aaKnown RBP16.02■□□□□ 0.15
VARS-215ENST00000375663 RNF31Q96EP0 1072 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 AHCYL2Q96HN2 611 aaKnown RBP16.02■□□□□ 0.15
VARS-215ENST00000375663 CARS2Q9HA77 564 aaKnown RBP16.02■□□□□ 0.15
VARS-215ENST00000375663 PSORS1C1Q9UIG5 152 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 DNMT3AQ9Y6K1 912 aaPredicted RBP16.02■□□□□ 0.15
VARS-215ENST00000375663 LRRN3E7EW58 273 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 PTHP01270 115 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 CLK3P49761 638 aaKnown RBP16.02■□□□□ 0.15
VARS-215ENST00000375663 CHST4Q8NCG5 386 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 HRASLS5Q96KN8 279 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 LRRN3Q9H3W5 708 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 ZNF69Q9UC07 566 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 PCDHGA2Q9Y5H1 932 aa16.02■□□□□ 0.15
VARS-215ENST00000375663 TOXO94900 526 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 KCNK5O95279 499 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 S100A9P06702 114 aaKnown RBP16.01■□□□□ 0.15
VARS-215ENST00000375663 CD2P06729 351 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 LCN1P31025 176 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 PYCR1P32322 319 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 OR12D2P58182 307 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 HBA1P69905 142 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 ACVR1Q04771 509 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 SPATC1Q76KD6 591 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 CEP76Q8TAP6 659 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 ELL3Q9HB65 397 aaPredicted RBP16.01■□□□□ 0.15
VARS-215ENST00000375663 TAS2R10Q9NYW0 307 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 LHX3Q9UBR4 397 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 ANKRD28O15084 1053 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 KMOO15229 486 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 LYRM1O43325 122 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 DNASE1P24855 282 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 TSPAN5P62079 268 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 NTRK2Q16620 822 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 PHC2Q8IXK0 858 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 JPH3Q8WXH2 748 aaPredicted RBP16.01■□□□□ 0.15
VARS-215ENST00000375663 CENPOQ9BU64 300 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 FOLH1BQ9HBA9 442 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 SPHK2Q9NRA0 654 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 ASB1Q9Y576 335 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 A0A1B0GTL3 188 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 EDDM13A0A1B0GTR0 161 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 A0A1W2PPK0 400 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 TCRBV5S2A0A599 114 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 TTC34A8MYJ7 566 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 KDM4BO94953 1096 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 LIPAP38571 399 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 CASP3P42574 277 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 SLC35A2P78381 396 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 SLC5A12Q1EHB4 618 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 C4orf46Q504U0 113 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 FAM180AQ6UWF9 173 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 KRT77Q7Z794 578 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 FAM83FQ8NEG4 500 aaPredicted RBP16.01■□□□□ 0.15
VARS-215ENST00000375663 OR51A7Q8NH64 312 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 SLC22A18Q96BI1 424 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 METTL2AQ96IZ6 378 aaKnown RBP16.01■□□□□ 0.15
VARS-215ENST00000375663 MS4A4AQ96JQ5 239 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 ELOVL2Q9NXB9 296 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 AP1M2Q9Y6Q5 423 aa16.01■□□□□ 0.15
VARS-215ENST00000375663 FXYD6-FXYD2A0A087WZ82 144 aa16■□□□□ 0.15
VARS-215ENST00000375663 FEZF1A0PJY2 475 aa16■□□□□ 0.15
VARS-215ENST00000375663 M0R233 179 aa16■□□□□ 0.15
VARS-215ENST00000375663 ACRP10323 421 aa16■□□□□ 0.15
VARS-215ENST00000375663 GP2P55259 537 aaKnown RBP16■□□□□ 0.15
VARS-215ENST00000375663 CNIH2Q6PI25 160 aa16■□□□□ 0.15
VARS-215ENST00000375663 SLC46A3Q7Z3Q1 461 aa16■□□□□ 0.15
VARS-215ENST00000375663 RPLP0P6Q8NHW5 317 aa16■□□□□ 0.15
VARS-215ENST00000375663 DEDD2Q8WXF8 326 aa16■□□□□ 0.15
VARS-215ENST00000375663 GTPBP2Q9BX10 602 aaKnown RBP16■□□□□ 0.15
VARS-215ENST00000375663 LGR4Q9BXB1 951 aa16■□□□□ 0.15
VARS-215ENST00000375663 FXYD6Q9H0Q3 95 aa16■□□□□ 0.15
VARS-215ENST00000375663 SLC35C2Q9NQQ7 365 aa16■□□□□ 0.15
VARS-215ENST00000375663 LIPT1Q9Y234 373 aa16■□□□□ 0.15
VARS-215ENST00000375663 STRCQ7RTU9 1775 aa16■□□□□ 0.15
VARS-215ENST00000375663 ZSCAN5BA6NJL1 495 aa16■□□□□ 0.15
VARS-215ENST00000375663 PRKYO43930 277 aa16■□□□□ 0.15
VARS-215ENST00000375663 GPR4P46093 362 aa16■□□□□ 0.15
VARS-215ENST00000375663 SLC8B1Q6J4K2 584 aa16■□□□□ 0.15
VARS-215ENST00000375663 LINC00299Q6ZSB3 139 aa16■□□□□ 0.15
VARS-215ENST00000375663 TMEM25Q86YD3 366 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms