RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CDKN3Q16667 212 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 FAM180AQ6UWF9 173 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 TDHQ8IZJ6 230 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 SLC5A8Q8N695 610 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 OR5K2Q8NHB8 316 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 DEFB126Q9BYW3 111 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 TUBB1Q9H4B7 451 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 TMEM138Q9NPI0 162 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 SDHAF3Q9NRP4 125 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 ABI3Q9P2A4 366 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 CNOT1A5YKK6 2376 aaKnown RBP17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 TAPBPO15533 448 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 TBX1O43435 398 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 AHSA1O95433 338 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 SLC5A12Q1EHB4 618 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 RUNDC3AQ59EK9 446 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 RNF111Q6ZNA4 994 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 TMPRSS9Q7Z410 1059 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 CHERPQ8IWX8 916 aaKnown RBP17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 ZNF676Q8N7Q3 588 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 FCGR1BQ92637 280 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 DAZLQ92904 295 aaKnown RBP17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 TIMM29Q9BSF4 260 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 DCSTAMPQ9H295 470 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 CKLFQ9UBR5 152 aa17.06■□□□□ 0.32
PTPDC1-202ENST00000375360 CLDN25C9JDP6 229 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 MAGEB3O15480 346 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 MRPL3P09001 348 aaKnown RBP17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 MAZP56270 477 aaKnown RBP17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 KIR2DS3Q14952 304 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 UGT3A2Q3SY77 523 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 TPRG1LQ5T0D9 272 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 OGFRL1Q5TC84 451 aaPredicted RBP17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 ALOXE3Q9BYJ1 711 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 YTHDF1Q9BYJ9 559 aaKnown RBP17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 FGF22Q9HCT0 170 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 KHDRBS3O75525 346 aaKnown RBP17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 HIST1H1TP22492 207 aaPredicted RBP17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 GPR4P46093 362 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 LRIT3Q3SXY7 679 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 ATCAYQ86WG3 371 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 MEX3DQ86XN8 651 aaKnown RBP17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 LINC00471Q8N535 108 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 FRMD1Q8N878 549 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 TMED9Q9BVK6 235 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 TRIP11Q15643 1979 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 NPIPA5A0A0B4J1W7 369 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 NPIPA7E9PJI5 369 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 B3GALT4O96024 378 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 NPIPA8P0DM63 369 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 ITGB8P26012 769 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 TNFRSF4P43489 277 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 CDKL1Q00532 357 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 HENMT1Q5T8I9 393 aaKnown RBP17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 ADGRG5Q8IZF4 528 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 NRG4Q8WWG1 115 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 RARRES3Q9UL19 164 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 ENTPD2Q9Y5L3 495 aa17.05■□□□□ 0.32
PTPDC1-202ENST00000375360 ZNF726A6NNF4 738 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 PSMD9O00233 223 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 DCTP40126 519 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 MAP2K4P45985 399 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 PLCXD2Q0VAA5 305 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 SLCO4C1Q6ZQN7 724 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 ZNF765Q7L2R6 523 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 OR4K5Q8NGD3 323 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 OR9Q2Q8NGE9 314 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 NKD1Q969G9 470 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 TEX37Q96LM6 180 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 MKRN2Q9H000 416 aaKnown RBP17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 P2RY12Q9H244 342 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 CLEC3AO75596 197 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 PEX11BO96011 259 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 FESP07332 822 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 QPRTQ15274 297 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 IDNKQ5T6J7 187 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 SLC27A4Q6P1M0 643 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 PLET1Q6UQ28 207 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 Q6ZNB5 142 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 IKBIPQ70UQ0 350 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 KLHL36Q8N4N3 616 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 FAM118AQ9NWS6 357 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 LOXHD1Q8IVV2 1947 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 ARHGEF15O94989 841 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 RHCEP18577 417 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 VLDLRP98155 873 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 FCHO2Q0JRZ9 810 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 TMEM236Q5W0B7 351 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 MCATQ8IVS2 390 aaKnown RBP17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 IL22RA1Q8N6P7 574 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 OR56A3Q8NH54 315 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 THEM6Q8WUY1 208 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 PDXPQ96GD0 296 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 ADAD1Q96M93 576 aaKnown RBP17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 BTNL2Q9UIR0 455 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 NAALAD2Q9Y3Q0 740 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 KIR2DS5A0A0G2JLQ3 304 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 A0A0G2JNG1 304 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 KIR2DS3K7RE56 304 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 DNASE1L1P49184 302 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms