RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 KCNC4Q03721 635 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 LINC00471Q8N535 108 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 LIN37Q96GY3 246 aaPredicted RBP13.7□□□□□ -0.22
TRAF1-201ENST00000373887 MCHR1Q99705 422 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 PRTFDC1Q9NRG1 225 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 SARDHQ9UL12 918 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 GNB3P16520 340 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 UGT2B10P36537 528 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 DEFB110Q30KQ9 67 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 LRCH3Q96II8 777 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 WDR37Q9Y2I8 494 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 WDR45Q9Y484 360 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 LRRC42Q9Y546 428 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 A0A1W2PPW3 197 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 DLX3O60479 287 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 RBBP9O75884 186 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 IFNA1P01562 189 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 RBMS1P29558 406 aaKnown RBP13.7□□□□□ -0.22
TRAF1-201ENST00000373887 CEACAM19Q7Z692 300 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 TSPAN33Q86UF1 283 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 CCDC116Q8IYX3 515 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 NEIL3Q8TAT5 605 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 ZDHHC1Q8WTX9 485 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 THAP4Q8WY91 577 aa13.7□□□□□ -0.22
TRAF1-201ENST00000373887 HTR2AP28223 471 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 ACVR1BP36896 505 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 TMPRSS12Q86WS5 348 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 PACRGLQ8N7B6 248 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 OR6C4Q8NGE1 309 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 OR1F2PQ96R84 312 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 C8orf33Q9H7E9 229 aaPredicted RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 STYXL1Q9Y6J8 313 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 SOCS2O14508 198 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 ABCB7O75027 752 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 SHMT2P34897 504 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 SSX2Q16385 188 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 CYP1B1Q16678 543 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 LRRTM3Q86VH5 581 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 PDSS2Q86YH6 399 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 AVL9Q8NBF6 648 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF784Q8NCA9 323 aaPredicted RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 MS4A4AQ96JQ5 239 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 KATNBL1Q9H079 304 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 PREBQ9HCU5 417 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 COL2A1P02458 1487 aaPredicted RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 OR12D1P0DN82 309 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 CELP19835 753 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 DEFB133Q30KQ1 61 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 UBQLNLQ8IYU4 475 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 C1orf74Q96LT6 269 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 YTHDF1Q9BYJ9 559 aaKnown RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 CD244Q9BZW8 370 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 PTBP2Q9UKA9 531 aaKnown RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 MAS1P04201 325 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 ACRV1P26436 265 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 ERP29P30040 261 aaKnown RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 GINS1Q14691 196 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 RHBDD1Q8TEB9 315 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 PDE7BQ9NP56 450 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 A6NL46 340 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 HCRTR2O43614 444 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 H2AFB2P0C5Z0 115 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF182P17025 639 aaPredicted RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 CAMLGP49069 296 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 RAB5BP61020 215 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 PLEKHN1Q494U1 663 aaPredicted RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 TMPPEQ6ZT21 453 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 TRAPPC6BQ86SZ2 158 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 NATD1Q8N6N6 113 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 NLGN4YQ8NFZ3 816 aaPredicted RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 DDX1Q92499 740 aaKnown RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 MAELQ96JY0 434 aaKnown RBP13.69□□□□□ -0.22
TRAF1-201ENST00000373887 RDH12Q96NR8 316 aa13.69□□□□□ -0.22
TRAF1-201ENST00000373887 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 POU3F4P49335 361 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 WDR4P57081 412 aaKnown RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 GPX6P59796 221 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 POU6F2P78424 691 aaPredicted RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 DEFB134Q4QY38 66 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 TP53INP2Q8IXH6 220 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 RLN3Q8WXF3 142 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 PGAM5Q96HS1 289 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 ARL6Q9H0F7 186 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 COPZ2Q9P299 210 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 GNG13Q9P2W3 67 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 SYPP08247 313 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 PCSK2P16519 638 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 GABRA3P34903 492 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 WNT7BP56706 349 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 TRAM2Q15035 370 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 MOGQ16653 247 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 LRFN4Q6PJG9 635 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 IGDCC3Q8IVU1 814 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 PROKR1Q8TCW9 393 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 SOX17Q9H6I2 414 aaPredicted RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 TUBG2Q9NRH3 451 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 MRPL49Q13405 166 aaKnown RBP13.68□□□□□ -0.22
TRAF1-201ENST00000373887 LRIT3Q3SXY7 679 aa13.68□□□□□ -0.22
TRAF1-201ENST00000373887 FAM69BQ5VUD6 431 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms