RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 PIPSLA2A3N6 862 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 OR5K3A6NET4 321 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 HAT1O14929 419 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 B4GAT1O43505 415 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 TNFSF14O43557 240 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 UGDHO60701 494 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PEX11AO75192 247 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SH3BGRLO75368 114 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ETHE1O95571 254 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 KRT6AP02538 564 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 KRT6BP04259 564 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ALDOCP09972 364 aaKnown RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 PVRP15151 417 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ENGP17813 658 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 GRIA3P42263 894 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 DPP6P42658 865 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 KRT6CP48668 564 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 CCR8P51685 355 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 HNRNPH2P55795 449 aaKnown RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 RP1P56715 2156 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 OR1D5P58170 312 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 REEP5Q00765 189 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 CFHR1Q03591 330 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 IFT88Q13099 833 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 HABP2Q14520 560 aaPredicted RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 KIR2DS3Q14952 304 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ZIC1Q15915 447 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 CRB2Q5IJ48 1285 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 C6orf136Q5SQH8 315 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 NKAIN2Q5VXU1 208 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ZNF425Q6IV72 752 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 FBXO42Q6P3S6 717 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 RNF165Q6ZSG1 346 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PAQR7Q86WK9 346 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PLXDC1Q8IUK5 500 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 DDIASQ8IXT1 998 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 RAB42Q8N4Z0 105 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 OR10G6Q8NH81 332 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SPSB4Q96A44 273 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 TUBGCP3Q96CW5 907 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SLC45A3Q96JT2 553 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 MARK4Q96L34 752 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 MTERF1Q99551 399 aaKnown RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 DPH7Q9BTV6 452 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 EFCAB11Q9BUY7 163 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 GTPBP2Q9BX10 602 aaKnown RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 ACPTQ9BZG2 426 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 NMUR2Q9GZQ4 415 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 AICDAQ9GZX7 198 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ABCG4Q9H172 646 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 TP63Q9H3D4 680 aaPredicted RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 STN1Q9H668 368 aaKnown RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 NT5DC2Q9H857 520 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 CHODLQ9H9P2 273 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 UCK1Q9HA47 277 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 MRPS30Q9NP92 439 aaKnown RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 TMEM184CQ9NVA4 438 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 HRASLS2Q9NWW9 162 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 NLGN3Q9NZ94 848 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PPP4R1LQ9P1A2 415 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ARMCX1Q9P291 453 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 LRIT1Q9P2V4 623 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 GMEB2Q9UKD1 530 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 MYO15AQ9UKN7 3530 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 HSF4Q9ULV5 492 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SNX6Q9UNH7 406 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 TRBC2A0A5B9 178 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 GSAPA4D1B5 854 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 C9orf118A6NHY6 69 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 LILRA5A6NI73 299 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 CAPN14A8MX76 684 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 MAGEB17A8MXT2 336 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 C2orf74A8MZ97 194 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 H0YHG0 523 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 SLC28A1O00337 649 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 LSM1O15116 133 aaKnown RBP3.36□□□□□ -1.87
MCF2-202ENST00000370573 HCRTR1O43613 425 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 DFNA5O60443 496 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 CTSVO60911 334 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 PGM3O95394 542 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 CHEK2O96017 543 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 KNG1P01042 644 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 STATHP02808 62 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 PROS1P07225 676 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 SERPINA6P08185 405 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 ADRB1P08588 477 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 T-ENOLP0DO92 83 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 PCNAP12004 261 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 LBPP18428 481 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 NCF2P19878 526 aaPredicted RBP3.36□□□□□ -1.87
MCF2-202ENST00000370573 MAGP20916 626 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 CMPK1P30085 196 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 CCT8P50990 548 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 CLNS1AP54105 237 aaKnown RBP3.36□□□□□ -1.87
MCF2-202ENST00000370573 DIO3P55073 304 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 RPS13P62277 151 aaKnown RBP3.36□□□□□ -1.87
MCF2-202ENST00000370573 ABATP80404 500 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 DDX39BQ13838 428 aaKnown RBP3.36□□□□□ -1.87
MCF2-202ENST00000370573 KIAA0040Q15053 153 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 RBBP5Q15291 538 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms