RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SLC35A5Q9BS91 424 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 KLHL4Q9C0H6 718 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 RAD21L1Q9H4I0 556 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 GORASP2Q9H8Y8 452 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 MOV10Q9HCE1 1003 aaKnown RBP11.37□□□□□ -0.59
USF1-203ENST00000368021 TOR4AQ9NXH8 423 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 PRELID1Q9Y255 219 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 MRPS2Q9Y399 296 aaKnown RBP11.37□□□□□ -0.59
USF1-203ENST00000368021 SPACA6W5XKT8 324 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 LAMA5O15230 3695 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 MED19A0JLT2 244 aaPredicted RBP11.37□□□□□ -0.59
USF1-203ENST00000368021 CPED1A4D0V7 1026 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 EIF4E1BA6NMX2 242 aaKnown RBP11.37□□□□□ -0.59
USF1-203ENST00000368021 MYO1GB0I1T2 1018 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 PGRMC2O15173 223 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 GMNNO75496 209 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 KRT75O95678 551 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 UMPSP11172 480 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 IL1RNP18510 177 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 UQCRC2P22695 453 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 CPN2P22792 545 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 BCAP31P51572 246 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 FADDQ13158 208 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 RUNX2Q13950 521 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 RGNQ15493 299 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 CPZQ66K79 652 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 GLYATQ6IB77 296 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 GUSBP11Q6P575 273 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 TMEM71Q6P5X7 295 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 ERICH5Q6P6B1 374 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 MICU2Q8IYU8 434 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 C10orf111Q8N326 155 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 D2HGDHQ8N465 521 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 OR52N2Q8NGI0 321 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 NRG4Q8WWG1 115 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 POP5Q969H6 163 aaKnown RBP11.37□□□□□ -0.59
USF1-203ENST00000368021 NMD3Q96D46 503 aaKnown RBP11.37□□□□□ -0.59
USF1-203ENST00000368021 AMDHD1Q96NU7 426 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 DPYSL5Q9BPU6 564 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 CHST8Q9H2A9 424 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 TPK1Q9H3S4 243 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 PIF1Q9H611 641 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 ANKHQ9HCJ1 492 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 GIMAP4Q9NUV9 329 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 RAB26Q9ULW5 256 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 USP22Q9UPT9 525 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 NAALAD2Q9Y3Q0 740 aa11.37□□□□□ -0.59
USF1-203ENST00000368021 AKAP13Q12802 2813 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 GLOD5A6NK44 160 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 GPIP06744 558 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 CKMT1AP12532 417 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 CKMT2P17540 419 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 SPINK2P20155 84 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 SLC7A1P30825 629 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 TTKP33981 857 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 MVDP53602 400 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 CLDN6P56747 220 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 FOXC1Q12948 553 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 CYP51A1Q16850 503 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 ZNF829Q3KNS6 432 aaPredicted RBP11.36□□□□□ -0.59
USF1-203ENST00000368021 RBM44Q6ZP01 1051 aaKnown RBP11.36□□□□□ -0.59
USF1-203ENST00000368021 USP53Q70EK8 1073 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 PRSS41Q7RTY9 318 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 ZNF551Q7Z340 670 aaPredicted RBP11.36□□□□□ -0.59
USF1-203ENST00000368021 SPPL2CQ8IUH8 684 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 UCN3Q969E3 161 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 CNRIP1Q96F85 164 aaPredicted RBP11.36□□□□□ -0.59
USF1-203ENST00000368021 C10orf90Q96M02 699 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 NSMCE2Q96MF7 247 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 BBS4Q96RK4 519 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 DPH2Q9BQC3 489 aaPredicted RBP11.36□□□□□ -0.59
USF1-203ENST00000368021 RBM38Q9H0Z9 239 aaKnown RBP11.36□□□□□ -0.59
USF1-203ENST00000368021 GLIPR2Q9H4G4 154 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 ZNF768Q9H5H4 540 aaKnown RBP11.36□□□□□ -0.59
USF1-203ENST00000368021 RPF2Q9H7B2 306 aaKnown RBP11.36□□□□□ -0.59
USF1-203ENST00000368021 CXorf36Q9H7Y0 433 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 STARD5Q9NSY2 213 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 IL20Q9NYY1 176 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 KLHL3Q9UH77 587 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 ENTPD4Q9Y227 616 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 ZNF780BQ9Y6R6 833 aa11.36□□□□□ -0.59
USF1-203ENST00000368021 CEP295Q9C0D2 2601 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 hCG_2014768A0A024R1R8 64 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 TCRBV5S2A0A599 114 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 DHRS12A0PJE2 317 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 GSTA4O15217 222 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 CASC3O15234 703 aaKnown RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 SLC22A1O15245 554 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 PRKRAO75569 313 aaKnown RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 NSA2O95478 260 aaKnown RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 CPNE6O95741 557 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 CTSBP07858 339 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 ALOX5P09917 674 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 ANKRD34CP0C6C1 535 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 NCK1P16333 377 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 NELFEP18615 380 aaKnown RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 CSNK2A2P19784 350 aaPredicted RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 PSMA4P25789 261 aaKnown RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 MPIP34949 423 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms