RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TECPR1Q7Z6L1 1165 aa13.96□□□□□ -0.17
PRKN-204ENST00000366896 TCTE3Q8IZS6 198 aa13.96□□□□□ -0.17
PRKN-204ENST00000366896 VANGL1Q8TAA9 524 aaPredicted RBP13.96□□□□□ -0.17
PRKN-204ENST00000366896 SORCS1Q8WY21 1168 aa13.96□□□□□ -0.17
PRKN-204ENST00000366896 BEX2Q9BXY8 128 aa13.96□□□□□ -0.17
PRKN-204ENST00000366896 RACGAP1Q9H0H5 632 aa13.96□□□□□ -0.17
PRKN-204ENST00000366896 EXOSC4Q9NPD3 245 aaKnown RBP13.96□□□□□ -0.17
PRKN-204ENST00000366896 KCND3Q9UK17 655 aa13.96□□□□□ -0.17
PRKN-204ENST00000366896 ENPP4Q9Y6X5 453 aa13.96□□□□□ -0.17
PRKN-204ENST00000366896 ZAR1LA6NP61 321 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 PCDH17O14917 1159 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 LEFTY1O75610 366 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 PKLRP30613 574 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 GDI1P31150 447 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 FAPQ12884 760 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 EFR3AQ14156 821 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 SMAD2Q15796 467 aaKnown RBP13.96□□□□□ -0.18
PRKN-204ENST00000366896 ZNF284Q2VY69 593 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 GAB4Q2WGN9 574 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 IKBIPQ70UQ0 350 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 COMMD6Q7Z4G1 85 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 WDR48Q8TAF3 677 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 GLYATL1Q969I3 302 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 FRMD6Q96NE9 622 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 TRMT61BQ9BVS5 477 aaKnown RBP13.96□□□□□ -0.18
PRKN-204ENST00000366896 PHF7Q9BWX1 381 aaPredicted RBP13.96□□□□□ -0.18
PRKN-204ENST00000366896 SGPP1Q9BX95 441 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 C11orf54Q9H0W9 315 aaPredicted RBP13.96□□□□□ -0.18
PRKN-204ENST00000366896 RNF121Q9H920 327 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 STMN3Q9NZ72 180 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 ICKQ9UPZ9 632 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 CMAHPQ9Y471 501 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 MAP4K5Q9Y4K4 846 aa13.96□□□□□ -0.18
PRKN-204ENST00000366896 IQCMA0A1B0GVH7 501 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 CPNE3O75131 537 aaKnown RBP13.95□□□□□ -0.18
PRKN-204ENST00000366896 HLA-DMAP28067 261 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 IFNA8P32881 189 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 RECQLP46063 649 aaPredicted RBP13.95□□□□□ -0.18
PRKN-204ENST00000366896 OR3A3P47888 321 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 RHAGQ02094 409 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 SLC35F1Q5T1Q4 408 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 C12orf40Q86WS4 652 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 SLC44A2Q8IWA5 706 aaPredicted RBP13.95□□□□□ -0.18
PRKN-204ENST00000366896 GTPBP3Q969Y2 492 aaKnown RBP13.95□□□□□ -0.18
PRKN-204ENST00000366896 PPCDCQ96CD2 204 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 DMRT3Q9NQL9 472 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 TOR4AQ9NXH8 423 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 FTSJ1Q9UET6 329 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 NDOR1Q9UHB4 597 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 ANGPT4Q9Y264 503 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 PRAMEF33A0A0G2JMD5 474 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 OR6C70A6NIJ9 312 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 ZSCAN5BA6NJL1 495 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 ZNF670-ZNF695F2Z2N8 137 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 CACNB4O00305 520 aaPredicted RBP13.95□□□□□ -0.18
PRKN-204ENST00000366896 PRAMEF10O60809 474 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 CCNB2O95067 398 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 DGKEP52429 567 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 TBPL1P62380 186 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 MEF2AQ02078 507 aaPredicted RBP13.95□□□□□ -0.18
PRKN-204ENST00000366896 RUNX1T1Q06455 604 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 RUNX3Q13761 415 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 GANABQ14697 944 aaKnown RBP13.95□□□□□ -0.18
PRKN-204ENST00000366896 ARSIQ5FYB1 569 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 TMEM215Q68D42 235 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 DPPA4Q7L190 304 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 PLCZ1Q86YW0 608 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.95□□□□□ -0.18
PRKN-204ENST00000366896 ETFBKMTQ8IXQ9 262 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 NRSN1Q8IZ57 195 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 FAM109AQ8N4B1 249 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 CYB5D2Q8WUJ1 264 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 LRIG1Q96JA1 1093 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 TMEM245Q9H330 911 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 OR51B5Q9H339 312 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 SNTG1Q9NSN8 517 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 RHCGQ9UBD6 479 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 LSM2Q9Y333 95 aaKnown RBP13.95□□□□□ -0.18
PRKN-204ENST00000366896 DSPPQ9NZW4 1301 aa13.95□□□□□ -0.18
PRKN-204ENST00000366896 KLHL18O94889 574 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 C1orf105O95561 183 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 TGFB1P01137 390 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 CTSLP07711 333 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 CSF3P09919 207 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 C1GALT1C1LP0DN25 315 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 TIMP2P16035 220 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 CRYBB2P43320 205 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 VASPP50552 380 aaPredicted RBP13.94□□□□□ -0.18
PRKN-204ENST00000366896 DAB2P98082 770 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 SLBPQ14493 270 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRKN-204ENST00000366896 PTGES3Q15185 160 aaKnown RBP13.94□□□□□ -0.18
PRKN-204ENST00000366896 TIGD3Q6B0B8 471 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 XKRXQ6PP77 449 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 KIAA0907Q7Z7F0 614 aaPredicted RBP13.94□□□□□ -0.18
PRKN-204ENST00000366896 ADIPOR2Q86V24 386 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 CCDC28AQ8IWP9 274 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 MMP21Q8N119 569 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 C16orf78Q8WTQ4 265 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 ZNF480Q8WV37 535 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 SNAPC3Q92966 411 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms