RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 FAM199XQ6PEV8 388 aaPredicted RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 SPNS3Q6ZMD2 512 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 OOSP2Q86WS3 158 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 PPP1R3BQ86XI6 285 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 FAM20CQ8IXL6 584 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 TMEM132CQ8N3T6 1108 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 NATD1Q8N6N6 113 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 GOLM1Q8NBJ4 401 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 SRFBP1Q8NEF9 429 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 VPS37AQ8NEZ2 397 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 OR7A2PQ8NGA2 310 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 SLC26A7Q8TE54 656 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 GFM2Q969S9 779 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 DUS3LQ96G46 650 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 ZNF764Q96H86 408 aaPredicted RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 PPM1MQ96MI6 270 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 F2RL3Q96RI0 385 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 SMAD5Q99717 465 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 BARD1Q99728 777 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 DUSP26Q9BV47 211 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 TRIM15Q9C019 465 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 ALG2Q9H553 416 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 DDX31Q9H8H2 851 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 ATAD3AQ9NVI7 634 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 GPR83Q9NYM4 423 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 VAPAQ9P0L0 249 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 STOML1Q9UBI4 398 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 BTNL2Q9UIR0 455 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 EXO1Q9UQ84 846 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 B3GNT3Q9Y2A9 372 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 ACANP16112 2415 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 PRSS51A0A1B0GVH4 220 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 H0Y3Z8 333 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 RNASET2O00584 256 aaKnown RBP10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 RFXANKO14593 260 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 C8BP07358 591 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 LAMP1P11279 417 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 ANPEPP15144 967 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 TCN1P20061 433 aaPredicted RBP10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 PTPN6P29350 595 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 PTGER4P35408 488 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 MSX2P35548 267 aaPredicted RBP10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 TSFMP43897 325 aaKnown RBP10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 GSK3BP49841 420 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 TAS2R50P59544 299 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 LIPEQ05469 1076 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 C2orf80Q0P641 193 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 RABL3Q5HYI8 236 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 CCNYL2Q5T2Q4 361 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 IRAK1BP1Q5VVH5 260 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 OR4C11Q6IEV9 310 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 LCN8Q6JVE9 175 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 FIGLAQ6QHK4 219 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 SPESP1Q6UW49 350 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 UBE3DQ7Z6J8 389 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 NUDT13Q86X67 352 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 DHFR2Q86XF0 187 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 PLD3Q8IV08 490 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 MSRB3Q8IXL7 192 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 FAM156AQ8NDB6 213 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 ST6GALNAC3Q8NDV1 305 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 BHLHE22Q8NFJ8 381 aaPredicted RBP10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 NT5CQ8TCD5 201 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 CCDC115Q96NT0 180 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 TGM7Q96PF1 710 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 KCTD14Q9BQ13 255 aaPredicted RBP10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 PCDHAC1Q9H158 963 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 HRASLS2Q9NWW9 162 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 SLC25A37Q9NYZ2 338 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 ACTR3BQ9P1U1 418 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 PCDHB14Q9Y5E9 798 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 GMEB1Q9Y692 573 aa10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 NCOA6Q14686 2063 aaPredicted RBP10.57□□□□□ -0.72
CSNK1E-202ENST00000366216 A0A0A6YYD5 115 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 A0A0J9YY10 115 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 TCRBV3S1A0A5B6 114 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 GSAPA4D1B5 854 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 OR5K3A6NET4 321 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 LILRA5A6NI73 299 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 AQP12BA6NM10 295 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 ZCCHC18P0CG32 403 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 HOXB1P14653 301 aaPredicted RBP10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 TYRP1P17643 537 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 MAPK12P53778 367 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 STXBP1P61764 594 aaKnown RBP10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 PPP1CAP62136 330 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 PLIN5Q00G26 463 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 KLC1Q07866 573 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 TGM3Q08188 693 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 HYAL2Q12891 473 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 HEPACAMQ14CZ8 416 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 CRB2Q5IJ48 1285 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 FCRL6Q6DN72 434 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 LCN10Q6JVE6 187 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 PWWP2BQ6NUJ5 590 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 FBXO42Q6P3S6 717 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 KLHL35Q6PF15 583 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 AQP12AQ8IXF9 295 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms