RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 PLOD2O00469 737 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 RNASET2O00584 256 aaKnown RBP12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 PLOD3O60568 738 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 DDAH2O95865 285 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 KIR3DL1P43629 444 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 NCBP2P52298 156 aaKnown RBP eCLIP12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 CHAF1BQ13112 559 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 SQLEQ14534 574 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 TBR1Q16650 682 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 TMEM198Q66K66 360 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 H3F3CQ6NXT2 135 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 CPLX4Q7Z7G2 160 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 CCDC116Q8IYX3 515 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 LGI4Q8N135 537 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 ARMC10Q8N2F6 343 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 VWA5B2Q8N398 1253 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 KRTCAP2Q8N6L1 136 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 OR7A2PQ8NGA2 310 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 PSMA8Q8TAA3 256 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF721Q8TF20 911 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 NCLNQ969V3 563 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 DUSP26Q9BV47 211 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 EPN3Q9H201 632 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 ADNPQ9H2P0 1102 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 NEUROD4Q9HD90 331 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 FAM120CQ9NX05 1096 aaKnown RBP12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 PTGFRNQ9P2B2 879 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF639Q9UID6 485 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 TEKT2Q9UIF3 430 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 PRSS51A0A1B0GVH4 220 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 A8MUA0 341 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 SHOX2O60902 331 aaPredicted RBP12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 ALPPP05187 535 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 LAMP1P11279 417 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 NT5EP21589 574 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 DRD4P21917 467 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 ITGA3P26006 1051 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 ADSLP30566 484 aaPredicted RBP12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 SEC24CP53992 1094 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 MANFP55145 182 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 UFM1P61960 85 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 Q0VFX4 171 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 MGAT2Q10469 447 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 MYBPC3Q14896 1274 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF750Q32MQ0 723 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF385BQ569K4 471 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF628Q5EBL2 1059 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 HSDL2Q6YN16 418 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 MSANTD1Q6ZTZ1 278 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 SPATA21Q7Z572 469 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 MTERF4Q7Z6M4 381 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 HPS6Q86YV9 775 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 CPSF7Q8N684 471 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 SLC5A8Q8N695 610 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 OR5L2Q8NGL0 311 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 NUBPLQ8TB37 319 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 C10orf82Q8WW14 230 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 OR5P2Q8WZ92 322 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 THOC1Q96FV9 657 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 WBP1Q96G27 269 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 THOC3Q96J01 351 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 OR8D2Q9GZM6 311 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 GLIPR2Q9H4G4 154 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 MAT2BQ9NZL9 334 aa12.88□□□□□ -0.35
NSMCE1-201ENST00000361439 A0A1W2PRB8 838 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 FAM234BA2RU67 622 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 MKRN2OSH3BPM6 223 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 ERVH48-1M5A8F1 160 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 SLC22A2O15244 555 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 SNX3O60493 162 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 ZFAND5O76080 213 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 PGRP06401 933 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 SFTPCP11686 197 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 NCF2P19878 526 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 S1PR1P21453 382 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 GPX3P22352 226 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 S100A3P33764 101 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 CCL11P51671 97 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 PGDP52209 483 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 SLC37A1P57057 533 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 PSPHP78330 225 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF267Q14586 743 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 PRSS53Q2L4Q9 553 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 MPEG1Q2M385 716 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 COL28A1Q2UY09 1125 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 PGS1Q32NB8 556 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 FAM174BQ3ZCQ3 159 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 CRB2Q5IJ48 1285 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 AGAP7PQ5VUJ5 663 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 DGAT2L6Q6ZPD8 337 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 C17orf47Q8NEP4 570 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 OR9A2Q8NGT5 310 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 TSPEARQ8WU66 669 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 MOAP1Q96BY2 351 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 TEX37Q96LM6 180 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 AGAP4Q96P64 663 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 DEFB126Q9BYW3 111 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 SLAMF7Q9NQ25 335 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 NTMQ9P121 344 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms