RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 NOTCH4Q99466 2003 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 MTCL1Q9Y4B5 1905 aaKnown RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TRIM43BA6NCK2 446 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 PSMD11O00231 422 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 FOXE1O00358 373 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 MRPS14O60783 128 aaKnown RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 RFPL2O75678 378 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 KLHL18O94889 574 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 GABARAPO95166 117 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 RHOP08100 348 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 CISD3P0C7P0 127 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 CYP4B1P13584 511 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 NPPBP16860 134 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF12P17014 697 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 EFNA1P20827 205 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 FMO3P31513 532 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 PCGF2P35227 344 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 RPS13P62277 151 aaKnown RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 LRRC74AQ0VAA2 488 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 NPTX1Q15818 432 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 KIAA1614Q5VZ46 1190 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 RPTNQ6XPR3 784 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 FAM124AQ86V42 546 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 HORMAD1Q86X24 394 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 LRRC56Q8IYG6 542 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 NAGSQ8N159 534 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF480Q8WV37 535 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TRIM43Q96BQ3 446 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 AP2M1Q96CW1 435 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 YIPF6Q96EC8 236 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 COQ10AQ96MF6 247 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 APOL4Q9BPW4 351 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TCF25Q9BQ70 676 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 THUMPD1Q9NXG2 353 aaKnown RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 AASSQ9UDR5 926 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TPRKBQ9Y3C4 175 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 GMPPBQ9Y5P6 360 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 KCNE2Q9Y6J6 123 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 SH3BGRLO75368 114 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 C9P02748 559 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 MT-ND5P03915 603 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 SRPRAP08240 638 aaKnown RBP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF8P17098 575 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 NNMTP40261 264 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 PNLIPRP1P54315 467 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 SELENOWP63302 87 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 BCL7AQ4VC05 210 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF385BQ569K4 471 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 PRSS36Q5K4E3 855 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 MED27Q6P2C8 311 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 PARS2Q7L3T8 475 aaKnown RBP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 LAS2Q8IYD9 372 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 MRPL43Q8N983 215 aaKnown RBP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 ABHD11Q8NFV4 315 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 MAL2Q969L2 176 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 OTUB2Q96DC9 234 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 DOHHQ9BU89 302 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 SGPP1Q9BX95 441 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 GABARAPL3Q9BY60 117 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 REEP1Q9H902 201 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 KIF17Q9P2E2 1029 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF282Q9UDV7 671 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 WARS2Q9UGM6 360 aaKnown RBP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 VPS4AQ9UN37 437 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 SH2B3Q9UQQ2 575 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 B3GNT3Q9Y2A9 372 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 WNT6Q9Y6F9 365 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 NUP214P35658 2090 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 A6NLC8 198 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 RAB27BO00194 218 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 SUV39H1O43463 412 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 WBP4O75554 376 aaKnown RBP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 ZBTB11O95625 1053 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 TFPTP0C1Z6 253 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 ELFN1P0C7U0 828 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 HPCAL1P37235 193 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 PXNP49023 591 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-202ENST00000360642 TLE1Q04724 770 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 NPRL3Q12980 569 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 PDE7AQ13946 482 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 MST1LQ2TV78 715 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 LINC00299Q6ZSB3 139 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 RTL10Q7L3V2 364 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 VN1R2Q8NFZ6 395 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 CDC26Q8NHZ8 85 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 MIPOL1Q8TD10 442 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 GIPC3Q8TF64 312 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 APH1BQ8WW43 257 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 DTD2Q96FN9 168 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 TPD52L3Q96J77 140 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 SNX22Q96L94 193 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 FOPNLQ96NB1 174 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 EHD1Q9H4M9 534 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 KRT84Q9NSB2 600 aa6.94□□□□□ -1.3
CLCN3-202ENST00000360642 TMEM265A0A087WTH1 108 aa6.93□□□□□ -1.3
CLCN3-202ENST00000360642 MGAT4DA6NG13 374 aa6.93□□□□□ -1.3
CLCN3-202ENST00000360642 PCDH7O60245 1069 aa6.93□□□□□ -1.3
CLCN3-202ENST00000360642 SULT1C4O75897 302 aa6.93□□□□□ -1.3
CLCN3-202ENST00000360642 NR4A1P22736 598 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms