RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 GLYATL1Q969I3 302 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 PDE7BQ9NP56 450 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 FAM163BP0C2L3 166 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 FAM205BPQ63HN1 556 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 MAELQ96JY0 434 aaKnown RBP17.57■□□□□ 0.4
SHANK1-202ENST00000359082 SPATA6Q9NWH7 488 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-202ENST00000359082 PAK1IP1Q9NWT1 392 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-202ENST00000359082 SLC16A5O15375 505 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 BCL2L15Q5TBC7 163 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 TMEM151BQ8IW70 566 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 CPT1CQ8TCG5 803 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 TRIB2Q92519 343 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 PITX2Q99697 317 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 MMP27Q9H306 513 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 B4GALT7Q9UBV7 327 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 B3GALT1Q9Y5Z6 326 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 GPR157Q5UAW9 335 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 OR4N5Q8IXE1 308 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 NLGN4YQ8NFZ3 816 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-202ENST00000359082 OR52E2Q8NGJ4 325 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 TCEAL4Q96EI5 215 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 FAM46AQ96IP4 442 aaKnown RBP17.57■□□□□ 0.4
SHANK1-202ENST00000359082 MRGPRX2Q96LB1 330 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 WDR92Q96MX6 357 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 CNN2Q99439 309 aaKnown RBP17.57■□□□□ 0.4
SHANK1-202ENST00000359082 DNTTIP1Q9H147 329 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 EEF1E1-BLOC1S5C9J1V9 151 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 RHOP08100 348 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 NR4A2P43354 598 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 CDKN2DP55273 166 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 KCNAB2Q13303 367 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 RPL13AP3Q6NVV1 102 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 SPRYD4Q8WW59 207 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-202ENST00000359082 URM1Q9BTM9 101 aaKnown RBP17.57■□□□□ 0.4
SHANK1-202ENST00000359082 CA14Q9ULX7 337 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 SLC45A1Q9Y2W3 748 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 OXTRP30559 389 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 POU4F2Q12837 409 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 FAM214AQ32MH5 1076 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 ITFG2Q969R8 447 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 SGTBQ96EQ0 304 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 TMEM246Q9BRR3 403 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 SRRDQ9UH36 339 aa17.57■□□□□ 0.4
SHANK1-202ENST00000359082 GGT3PA6NGU5 568 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 KIAA0513O60268 411 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 SOCS5O75159 536 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 LATS1O95835 1130 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 CTHP32929 405 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 PGGT1BP53609 377 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 CSNK1A1LQ8N752 337 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 RADILQ96JH8 1075 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 RAD9AQ99638 391 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 ERVK13-1Q9NX77 482 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 PCDH10Q9P2E7 1040 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 MYEF2Q9P2K5 600 aaKnown RBP17.56■□□□□ 0.4
SHANK1-202ENST00000359082 CCDC163A0A0D9SF12 145 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 DUX1O43812 170 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 APOFQ13790 326 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 C18orf21Q32NC0 220 aaPredicted RBP17.56■□□□□ 0.4
SHANK1-202ENST00000359082 LEG1Q6P5S2 330 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 CCDC28AQ8IWP9 274 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 MYNNQ9NPC7 610 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 TBCCD1Q9NVR7 557 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 ADAM18Q9Y3Q7 739 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 C1orf226A1L170 272 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 IGLON5A6NGN9 336 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 GCGRP47871 477 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 PPA1Q15181 289 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 RSU1Q15404 277 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 UPP1Q16831 310 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 IGSF8Q969P0 613 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 FAM46BQ96A09 425 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 LRRC46Q96FV0 321 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 H0YAE9 185 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 SNAPC5O75971 98 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 IL22RA1Q8N6P7 574 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 SIGLEC10Q96LC7 697 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 C1orf74Q96LT6 269 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 PTBP2Q9UKA9 531 aaKnown RBP17.56■□□□□ 0.4
SHANK1-202ENST00000359082 STUB1Q9UNE7 303 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 UBE2J1Q9Y385 318 aaPredicted RBP17.56■□□□□ 0.4
SHANK1-202ENST00000359082 PCDHGA8Q9Y5G5 932 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 GSRP00390 522 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 MT-ND2P03891 347 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 ADRB3P13945 408 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 HOXB9P17482 250 aaPredicted RBP17.56■□□□□ 0.4
SHANK1-202ENST00000359082 MFSD13AQ14CX5 517 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 DHCR24Q15392 516 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 TECRLQ5HYJ1 363 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 UGT2A3Q6UWM9 527 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 NCCRP1Q6ZVX7 275 aaPredicted RBP17.56■□□□□ 0.4
SHANK1-202ENST00000359082 RPLP0P6Q8NHW5 317 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 OR5B12Q96R08 314 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 DPCDQ9BVM2 203 aaPredicted RBP17.56■□□□□ 0.4
SHANK1-202ENST00000359082 TMEM9Q9P0T7 183 aa17.56■□□□□ 0.4
SHANK1-202ENST00000359082 GOSR2O14653 212 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 STSP08842 583 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 IL7P13232 177 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 PGCP20142 388 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 DUSP3P51452 185 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms