RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 TPBGQ13641 420 aa13.66□□□□□ -0.22
APP-205ENST00000358918 EXOSC2Q13868 293 aaKnown RBP13.66□□□□□ -0.22
APP-205ENST00000358918 LRRC32Q14392 662 aa13.66□□□□□ -0.22
APP-205ENST00000358918 GPR176Q14439 515 aa13.66□□□□□ -0.22
APP-205ENST00000358918 FGFBP1Q14512 234 aa13.66□□□□□ -0.22
APP-205ENST00000358918 CHRNA6Q15825 494 aa13.66□□□□□ -0.22
APP-205ENST00000358918 C3orf38Q5JPI3 329 aa13.66□□□□□ -0.22
APP-205ENST00000358918 LIPJQ5W064 366 aa13.66□□□□□ -0.22
APP-205ENST00000358918 TRILQ7L0X0 811 aa13.66□□□□□ -0.22
APP-205ENST00000358918 ZNF655Q8N720 491 aaPredicted RBP13.66□□□□□ -0.22
APP-205ENST00000358918 DPCDQ9BVM2 203 aaPredicted RBP13.66□□□□□ -0.22
APP-205ENST00000358918 ISYNA1Q9NPH2 558 aa13.66□□□□□ -0.22
APP-205ENST00000358918 CUEDC1Q9NWM3 386 aaPredicted RBP13.66□□□□□ -0.22
APP-205ENST00000358918 TAS2R7Q9NYW3 318 aa13.66□□□□□ -0.22
APP-205ENST00000358918 MAP4K5Q9Y4K4 846 aa13.66□□□□□ -0.22
APP-205ENST00000358918 C2orf78A6NCI8 922 aa13.65□□□□□ -0.22
APP-205ENST00000358918 LRRTM2O43300 516 aa13.65□□□□□ -0.22
APP-205ENST00000358918 TLX2O43763 284 aaPredicted RBP13.65□□□□□ -0.22
APP-205ENST00000358918 BPIP17213 487 aa13.65□□□□□ -0.22
APP-205ENST00000358918 HLA-FP30511 346 aa13.65□□□□□ -0.22
APP-205ENST00000358918 SLC6A1P30531 599 aa13.65□□□□□ -0.22
APP-205ENST00000358918 FGF9P31371 208 aaPredicted RBP13.65□□□□□ -0.22
APP-205ENST00000358918 BDKRB1P46663 353 aa13.65□□□□□ -0.22
APP-205ENST00000358918 SLC11A2P49281 568 aa13.65□□□□□ -0.22
APP-205ENST00000358918 HBA1P69905 142 aa13.65□□□□□ -0.22
APP-205ENST00000358918 EEF1A2Q05639 463 aaKnown RBP13.65□□□□□ -0.22
APP-205ENST00000358918 XKR6Q5GH73 641 aa13.65□□□□□ -0.22
APP-205ENST00000358918 RNF219Q5W0B1 726 aaPredicted RBP13.65□□□□□ -0.22
APP-205ENST00000358918 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.65□□□□□ -0.222e-7■□□□□ 10.3
APP-205ENST00000358918 USP45Q70EL2 814 aa13.65□□□□□ -0.22
APP-205ENST00000358918 NXPE1Q8N323 547 aa13.65□□□□□ -0.22
APP-205ENST00000358918 DTX3Q8N9I9 347 aa13.65□□□□□ -0.22
APP-205ENST00000358918 FBXO22Q8NEZ5 403 aa13.65□□□□□ -0.22
APP-205ENST00000358918 GATAD2BQ8WXI9 593 aa13.65□□□□□ -0.22
APP-205ENST00000358918 TMEM175Q9BSA9 504 aa13.65□□□□□ -0.22
APP-205ENST00000358918 BHLHE41Q9C0J9 482 aaPredicted RBP13.65□□□□□ -0.22
APP-205ENST00000358918 POLR2J3Q9H1A7 115 aaKnown RBP13.65□□□□□ -0.22
APP-205ENST00000358918 C1GALT1Q9NS00 363 aa13.65□□□□□ -0.22
APP-205ENST00000358918 ACSL6Q9UKU0 697 aa13.65□□□□□ -0.22
APP-205ENST00000358918 GNG14A0A1W2PPG7 69 aa13.65□□□□□ -0.22
APP-205ENST00000358918 SLC38A8A6NNN8 435 aa13.65□□□□□ -0.22
APP-205ENST00000358918 AKAP8O43823 692 aaKnown RBP13.65□□□□□ -0.22
APP-205ENST00000358918 C6orf47O95873 294 aa13.65□□□□□ -0.22
APP-205ENST00000358918 RRASP10301 218 aa13.65□□□□□ -0.22
APP-205ENST00000358918 CHI3L1P36222 383 aaPredicted RBP13.65□□□□□ -0.22
APP-205ENST00000358918 CLCNKAP51800 687 aa13.65□□□□□ -0.22
APP-205ENST00000358918 PTPN5P54829 565 aa13.65□□□□□ -0.22
APP-205ENST00000358918 CTBP2P56545 445 aa13.65□□□□□ -0.22
APP-205ENST00000358918 RHOAP61586 193 aa13.65□□□□□ -0.22
APP-205ENST00000358918 RAE1P78406 368 aaKnown RBP13.65□□□□□ -0.22
APP-205ENST00000358918 ARF5P84085 180 aa13.65□□□□□ -0.22
APP-205ENST00000358918 DCST1Q5T197 706 aa13.65□□□□□ -0.22
APP-205ENST00000358918 OR2G6Q5TZ20 316 aa13.65□□□□□ -0.22
APP-205ENST00000358918 GPAT4Q86UL3 456 aa13.65□□□□□ -0.22
APP-205ENST00000358918 ADGRG3Q86Y34 549 aa13.65□□□□□ -0.22
APP-205ENST00000358918 FAM26EQ8N5C1 309 aa13.65□□□□□ -0.22
APP-205ENST00000358918 OR11H7Q8NGC8 314 aa13.65□□□□□ -0.22
APP-205ENST00000358918 OR4K1Q8NGD4 311 aa13.65□□□□□ -0.22
APP-205ENST00000358918 WDR20Q8TBZ3 569 aa13.65□□□□□ -0.22
APP-205ENST00000358918 OTULINQ96BN8 352 aa13.65□□□□□ -0.22
APP-205ENST00000358918 TOE1Q96GM8 510 aaKnown RBP13.65□□□□□ -0.22
APP-205ENST00000358918 METTL2AQ96IZ6 378 aaKnown RBP13.65□□□□□ -0.22
APP-205ENST00000358918 RNF208Q9H0X6 261 aa13.65□□□□□ -0.22
APP-205ENST00000358918 ATG10Q9H0Y0 220 aa13.65□□□□□ -0.22
APP-205ENST00000358918 RC3H2Q9HBD1 1191 aaKnown RBP13.65□□□□□ -0.22
APP-205ENST00000358918 KLHL42Q9P2K6 505 aa13.65□□□□□ -0.22
APP-205ENST00000358918 LHX3Q9UBR4 397 aa13.65□□□□□ -0.22
APP-205ENST00000358918 PIPSLA2A3N6 862 aa13.64□□□□□ -0.23
APP-205ENST00000358918 GTPBP1O00178 669 aaKnown RBP13.64□□□□□ -0.23
APP-205ENST00000358918 FAAHO00519 579 aa13.64□□□□□ -0.23
APP-205ENST00000358918 FFAR1O14842 300 aa13.64□□□□□ -0.23
APP-205ENST00000358918 PRKYO43930 277 aa13.64□□□□□ -0.23
APP-205ENST00000358918 UGDHO60701 494 aa13.64□□□□□ -0.23
APP-205ENST00000358918 SH3BGRLO75368 114 aa13.64□□□□□ -0.23
APP-205ENST00000358918 OR56A5P0C7T3 313 aa13.64□□□□□ -0.23
APP-205ENST00000358918 CD22P20273 847 aa13.64□□□□□ -0.23
APP-205ENST00000358918 CCR7P32248 378 aa13.64□□□□□ -0.23
APP-205ENST00000358918 NSG1P42857 185 aa13.64□□□□□ -0.23
APP-205ENST00000358918 PCBP3P57721 371 aaKnown RBP13.64□□□□□ -0.23
APP-205ENST00000358918 HSF2Q03933 536 aa13.64□□□□□ -0.23
APP-205ENST00000358918 GPR33Q49SQ1 333 aa13.64□□□□□ -0.23
APP-205ENST00000358918 PLA1AQ53H76 456 aa13.64□□□□□ -0.23
APP-205ENST00000358918 ARSKQ6UWY0 536 aa13.64□□□□□ -0.23
APP-205ENST00000358918 ADGRD2Q7Z7M1 963 aa13.64□□□□□ -0.23
APP-205ENST00000358918 IQCF1Q8N6M8 205 aa13.64□□□□□ -0.23
APP-205ENST00000358918 GOT1L1Q8NHS2 421 aaPredicted RBP13.64□□□□□ -0.23
APP-205ENST00000358918 ZSWIM3Q96MP5 696 aa13.64□□□□□ -0.23
APP-205ENST00000358918 ZNF578Q96N58 590 aaPredicted RBP13.64□□□□□ -0.23
APP-205ENST00000358918 PRR14Q9BWN1 585 aa13.64□□□□□ -0.23
APP-205ENST00000358918 TNFRSF10DQ9UBN6 386 aa13.64□□□□□ -0.23
APP-205ENST00000358918 TESQ9UGI8 421 aaKnown RBP13.64□□□□□ -0.23
APP-205ENST00000358918 TRDV1A0A1B0GX56 115 aa13.64□□□□□ -0.23
APP-205ENST00000358918 TMEM129A0AVI4 362 aa13.64□□□□□ -0.23
APP-205ENST00000358918 C7orf66A4D0T2 115 aa13.64□□□□□ -0.23
APP-205ENST00000358918 SH3BP5O60239 455 aa13.64□□□□□ -0.23
APP-205ENST00000358918 NCR1O76036 304 aa13.64□□□□□ -0.23
APP-205ENST00000358918 SOD1P00441 154 aa13.64□□□□□ -0.23
APP-205ENST00000358918 HOXD4P09016 255 aaPredicted RBP13.64□□□□□ -0.23
APP-205ENST00000358918 HSD3B1P14060 373 aa13.64□□□□□ -0.23
APP-205ENST00000358918 PRKACAP17612 351 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms