RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 NEDD8-MDP1E9PL57 170 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 HMGN4O00479 90 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 ALX3O95076 343 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 AZGP1P25311 298 aaKnown RBP16.77■□□□□ 0.28
RTN4-204ENST00000357732 SDC2P34741 201 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 GIPRP48546 466 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 ZNF628Q5EBL2 1059 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 ENTPD8Q5MY95 495 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 LCN1P1Q5VSP4 162 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 KHDRBS2Q5VWX1 349 aaKnown RBP16.77■□□□□ 0.28
RTN4-204ENST00000357732 TNFAIP8L2Q6P589 184 aaPredicted RBP16.77■□□□□ 0.28
RTN4-204ENST00000357732 ZNF765Q7L2R6 523 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 PEX5LQ8IYB4 626 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 SLC46A2Q9BY10 475 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 PITHD1Q9GZP4 211 aaPredicted RBP16.77■□□□□ 0.28
RTN4-204ENST00000357732 C11orf54Q9H0W9 315 aaPredicted RBP16.77■□□□□ 0.28
RTN4-204ENST00000357732 SPNS1Q9H2V7 528 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 TVP23BQ9NYZ1 205 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 TBC1D14Q9P2M4 693 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 CCL26Q9Y258 94 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 SLC9A8Q9Y2E8 581 aa16.77■□□□□ 0.28
RTN4-204ENST00000357732 EXOSC1Q9Y3B2 195 aaKnown RBP16.77■□□□□ 0.28
RTN4-204ENST00000357732 TLX2O43763 284 aaPredicted RBP16.77■□□□□ 0.27
RTN4-204ENST00000357732 ACP2P11117 423 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 LAG3P18627 525 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 ERP29P30040 261 aaKnown RBP16.77■□□□□ 0.27
RTN4-204ENST00000357732 GABRA5P31644 462 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 QPRTQ15274 297 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 YIF1BQ5BJH7 314 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 IER5LQ5T953 404 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 C1orf94Q6P1W5 598 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 CD200R1LQ6Q8B3 271 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 ZNF730Q6ZMV8 503 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 QSOX2Q6ZRP7 698 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 TBC1D19Q8N5T2 526 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 DTD2Q96FN9 168 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 ZNF582Q96NG8 517 aaPredicted RBP16.77■□□□□ 0.27
RTN4-204ENST00000357732 PRRG3Q9BZD7 231 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 PELI2Q9HAT8 420 aa16.77■□□□□ 0.27
RTN4-204ENST00000357732 PLPP1O14494 284 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 PLD2O14939 933 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 PRODHO43272 600 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 PRKYO43930 277 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 SH3BP5O60239 455 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 CFL1P23528 166 aaKnown RBP16.76■□□□□ 0.27
RTN4-204ENST00000357732 PPP2R1BP30154 601 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 TSTA3Q13630 321 aaPredicted RBP16.76■□□□□ 0.27
RTN4-204ENST00000357732 RIN1Q13671 783 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 TMEM44Q2T9K0 475 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 VASH1Q7L8A9 365 aaPredicted RBP16.76■□□□□ 0.27
RTN4-204ENST00000357732 MRGPREQ86SM8 312 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 CACTIN-AS1Q8N1I8 211 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 ENKURQ8TC29 256 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 UFD1Q92890 307 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 IRF7Q92985 503 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 TM4SF18Q96CE8 201 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 LRR1Q96L50 414 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 PAQR5Q9NXK6 330 aaPredicted RBP16.76■□□□□ 0.27
RTN4-204ENST00000357732 GPR34Q9UPC5 381 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 SPIN1Q9Y657 262 aaPredicted RBP16.76■□□□□ 0.27
RTN4-204ENST00000357732 MAU2Q9Y6X3 613 aa16.76■□□□□ 0.27
RTN4-204ENST00000357732 NUP210Q8TEM1 1887 aaPredicted RBP16.76■□□□□ 0.27
RTN4-204ENST00000357732 ANHXE9PGG2 379 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 WWP2O00308 870 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 TGM5O43548 720 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 SPDYE7PQ495Y7 208 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 ATAT1Q5SQI0 421 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 C22orf42Q6IC83 251 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 MZT2BQ6NZ67 158 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 RAD51AP1Q96B01 352 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 MRGPRX3Q96LB0 322 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 COQ10AQ96MF6 247 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 TREX2Q9BQ50 279 aaPredicted RBP16.75■□□□□ 0.27
RTN4-204ENST00000357732 FNDC11Q9BVV2 318 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 ZNF717Q9BY31 904 aaPredicted RBP16.75■□□□□ 0.27
RTN4-204ENST00000357732 SLAMF7Q9NQ25 335 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 SIRT3Q9NTG7 399 aaPredicted RBP16.75■□□□□ 0.27
RTN4-204ENST00000357732 SAGE1Q9NXZ1 904 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 ADAM29Q9UKF5 820 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 SF3B6Q9Y3B4 125 aaKnown RBP16.75■□□□□ 0.27
RTN4-204ENST00000357732 PCDHGB7Q9Y5F8 929 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 MTCL1Q9Y4B5 1905 aaKnown RBP16.75■□□□□ 0.27
RTN4-204ENST00000357732 TFECO14948 347 aaPredicted RBP16.75■□□□□ 0.27
RTN4-204ENST00000357732 IGFBP1P08833 259 aaPredicted RBP16.75■□□□□ 0.27
RTN4-204ENST00000357732 TNNI3P19429 210 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 KELP23276 732 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 DDX6P26196 483 aaKnown RBP eCLIP16.75■□□□□ 0.274e-30■□□□□ 10.7
RTN4-204ENST00000357732 ACADLP28330 430 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 ETV5P41161 510 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 ETV1P50549 477 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 ANXA11P50995 505 aaKnown RBP16.75■□□□□ 0.27
RTN4-204ENST00000357732 MEF2AQ02078 507 aaPredicted RBP16.75■□□□□ 0.27
RTN4-204ENST00000357732 GNA13Q14344 377 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 GINS1Q14691 196 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 TAB1Q15750 504 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 PODNL1Q6PEZ8 512 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 SYCE2Q6PIF2 218 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 SLC36A4Q6YBV0 504 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 DUSP18Q8NEJ0 188 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 BBS10Q8TAM1 723 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms