RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 FBLP22087 321 aaKnown RBP17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 CCT3P49368 545 aaKnown RBP17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 POLE2P56282 527 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 MC2RQ01718 297 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 IL11RAQ14626 422 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 CYP51A1Q16850 503 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 TMEM107Q6UX40 140 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 RNF130Q86XS8 419 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 PTOV1Q86YD1 416 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 OR52N2Q8NGI0 321 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 KAT2AQ92830 837 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 COL26A1Q96A83 441 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 SLCO4A1Q96BD0 722 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 ELP4Q96EB1 424 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 NSMCE2Q96MF7 247 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 CCM2LQ9NUG4 571 aaPredicted RBP17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 ARMC1Q9NVT9 282 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 TRPC4Q9UBN4 977 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 MRPS33Q9Y291 106 aaKnown RBP17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 AP4S1Q9Y587 144 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 CCDC88CQ9P219 2028 aa17.02■□□□□ 0.32
SMARCD3-202ENST00000356800 DHRS12A0PJE2 317 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 BLACEA4D250 179 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 FOXD2O60548 495 aaPredicted RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ETFAP13804 333 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 MC3RP41968 323 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 SESN3P58005 492 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 IGLV3-21P80748 117 aaPredicted RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 FADDQ13158 208 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 SLC13A2Q13183 592 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 TRIP6Q15654 476 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 SPDYE7PQ495Y7 208 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ARHGAP40Q5TG30 622 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ANGPTL8Q6UXH0 198 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 TMEM64Q6YI46 380 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 MED25Q71SY5 747 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 COX15Q7KZN9 410 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 C6orf120Q7Z4R8 191 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 GLRX5Q86SX6 157 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 BPHLQ86WA6 291 aaPredicted RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ZZZ3Q8IYH5 903 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 PQLC1Q8N2U9 271 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 POP5Q969H6 163 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 PMEPA1Q969W9 287 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 RAD21L1Q9H4I0 556 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ANKRA2Q9H9E1 313 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 PRTFDC1Q9NRG1 225 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 SEMA3GQ9NS98 782 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 PCDHGA1Q9Y5H4 931 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ZFHX2Q9C0A1 2572 aaPredicted RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 CXCR6O00574 342 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 TNFRSF21O75509 655 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ATP1B1P05026 303 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 MAOAP21397 527 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 PSMA4P25789 261 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 RPS26P62854 115 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 MRPS35P82673 323 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 VMACQ2NL98 169 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ZNF628Q5EBL2 1059 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ZNF385CQ66K41 422 aaPredicted RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 DGAT2L6Q6ZPD8 337 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ZC3H7AQ8IWR0 971 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 OR7G2Q8NG99 324 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 SFXN5Q8TD22 340 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 DOK4Q8TEW6 326 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 CANT1Q8WVQ1 401 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 FIG4Q92562 907 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 MAGED4Q96JG8 741 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 OR1F2PQ96R84 312 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 EFHD1Q9BUP0 239 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 YIPF2Q9BWQ6 316 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 SLC7A5P2Q9GIP4 190 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 SERHL2Q9H4I8 314 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 FBXO8Q9NRD0 319 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 ZCCHC3Q9NUD5 404 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 RAPGEFL1Q9UHV5 662 aa17.01■□□□□ 0.31
SMARCD3-202ENST00000356800 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17■□□□□ 0.31
SMARCD3-202ENST00000356800 CLDN4O14493 209 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 POLR1CO15160 346 aaPredicted RBP17■□□□□ 0.31
SMARCD3-202ENST00000356800 BMP10O95393 424 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 PPP2R1BP30154 601 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 CRATP43155 626 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 EFNA3P52797 238 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 HSD17B7P56937 341 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 MGAT2Q10469 447 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 TP53BP2Q13625 1128 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 VEZF1Q14119 521 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 ISXQ2M1V0 245 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 LARP7Q4G0J3 582 aaKnown RBP eCLIP17■□□□□ 0.31
SMARCD3-202ENST00000356800 DHRS13Q6UX07 377 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 LRRC74BQ6ZQY2 392 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 ASCL5Q7RTU5 278 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 SLCO6A1Q86UG4 719 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 ADGRG5Q8IZF4 528 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 SIMC1Q8NDZ2 872 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 DEFB124Q8NES8 71 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 NRG4Q8WWG1 115 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 PPWD1Q96BP3 646 aaKnown RBP17■□□□□ 0.31
SMARCD3-202ENST00000356800 CLIP3Q96DZ5 547 aa17■□□□□ 0.31
SMARCD3-202ENST00000356800 NECTIN3Q9NQS3 549 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms